RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 RHBDD3Q9Y3P4 386 aa13.74□□□□□ -0.21
PABPC1-221ENST00000522720 PPIAL4AQ9Y536 164 aa13.74□□□□□ -0.21
PABPC1-221ENST00000522720 PPIAL4CA0A0B4J2A2 164 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 A0A0G2JMP0 313 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 A0A0X1KG70 313 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 MAGEB4O15481 346 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-221ENST00000522720 PNPP00491 289 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 CST4P01036 141 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 OR2T7P0C7T2 308 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 GATA3P23771 443 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 SRP14P37108 136 aaKnown RBP13.73□□□□□ -0.21
PABPC1-221ENST00000522720 SNRPGP62308 76 aaKnown RBP13.73□□□□□ -0.21
PABPC1-221ENST00000522720 ZNF404Q494X3 552 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 SLC25A30Q5SVS4 291 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 ZBTB49Q6ZSB9 765 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 OR4M2Q8NGB6 313 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 OR2T27Q8NH04 317 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 MBOAT4Q96T53 435 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 TMEM246Q9BRR3 403 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 PAPOLGQ9BWT3 736 aaKnown RBP13.73□□□□□ -0.21
PABPC1-221ENST00000522720 PBOV1Q9GZY1 135 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 VCXQ9H320 206 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 PPP1R3EQ9H7J1 279 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 NUFIP1Q9UHK0 495 aaKnown RBP13.73□□□□□ -0.21
PABPC1-221ENST00000522720 MRM2Q9UI43 246 aaKnown RBP13.73□□□□□ -0.21
PABPC1-221ENST00000522720 POLR3KQ9Y2Y1 108 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-221ENST00000522720 MPC1Q9Y5U8 109 aa13.73□□□□□ -0.21
PABPC1-221ENST00000522720 A0A1W2PQL4 384 aaPredicted RBP13.72□□□□□ -0.21
PABPC1-221ENST00000522720 A6NLC8 198 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 J3QLI3 93 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 SRSF10O75494 262 aaKnown RBP13.72□□□□□ -0.21
PABPC1-221ENST00000522720 IGLV3-1P01715 115 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 GNALP38405 381 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 MAP2K3P46734 347 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 IL5RAQ01344 420 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 DCAF12L2Q5VW00 463 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 KRT74Q7RTS7 529 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 C11orf53Q8IXP5 236 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 GALNT4Q8N4A0 578 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 ITPKCQ96DU7 683 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 TMPRSS13Q9BYE2 586 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 ABCB9Q9NP78 766 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 C1orf123Q9NWV4 160 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 MIOXQ9UGB7 285 aa13.72□□□□□ -0.21
PABPC1-221ENST00000522720 ANXA2P2A6NMY6 339 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 A8MXK9 166 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 CASQ2O14958 399 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-221ENST00000522720 ENTPD6O75354 484 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 APOL3O95236 402 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 TTRP02766 147 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 ATP6V1B1P15313 513 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 ATP6V1E1P36543 226 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 SEC61A1P61619 476 aaKnown RBP13.71□□□□□ -0.21
PABPC1-221ENST00000522720 MFGE8Q08431 387 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-221ENST00000522720 PRDX4Q13162 271 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 OCLNQ16625 522 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 ESCO2Q56NI9 601 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 ZNF684Q5T5D7 378 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 MEDAGQ5VYS4 303 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 C1orf229Q6ZS94 237 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-221ENST00000522720 ZNF826PQ6ZT77 177 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 SSX6Q7RTT6 188 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 WDR86Q86TI4 376 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 C19orf18Q8NEA5 215 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 OR10H4Q8NGA5 316 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 OR51E1Q8TCB6 317 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 OR5P3Q8WZ94 311 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 PPP1R14AQ96A00 147 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 TBX5Q99593 518 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 MICU1Q9BPX6 476 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 GPR84Q9NQS5 396 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 NKX1-2Q9UD57 310 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-221ENST00000522720 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.71□□□□□ -0.21
PABPC1-221ENST00000522720 LRCH1Q9Y2L9 728 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 R4GMQ9 66 aa13.71□□□□□ -0.21
PABPC1-221ENST00000522720 FBN1P35555 2871 aaKnown RBP13.71□□□□□ -0.22
PABPC1-221ENST00000522720 ZNF850A8MQ14 1090 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 LOC110117498-PIK3R3F6TDL0 507 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 LGALS8O00214 317 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 AVPP01185 164 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 LHBP01229 141 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 KRT8P05787 483 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 RPS2P15880 293 aaKnown RBP13.7□□□□□ -0.22
PABPC1-221ENST00000522720 MTNR1AP48039 350 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 ZNF154Q13106 437 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 FAM76BQ5HYJ3 339 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 PLEKHG7Q6ZR37 379 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 DCDC5Q6ZRR9 648 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 ELMOD2Q8IZ81 293 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 TEX29Q8N6K0 151 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 PACRGLQ8N7B6 248 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 BOLLQ8N9W6 283 aaKnown RBP13.7□□□□□ -0.22
PABPC1-221ENST00000522720 DEFB108BQ8NET1 73 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 OR1M1Q8NGA1 313 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 PIGCQ92535 297 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 NEIL1Q96FI4 390 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-221ENST00000522720 TLNRD1Q9H1K6 362 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 MOB1AQ9H8S9 216 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 MMP26Q9NRE1 261 aa13.7□□□□□ -0.22
PABPC1-221ENST00000522720 OR52A1Q9UKL2 312 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms