RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FAM53BQ14153 422 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 SPA17Q15506 151 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 LTB4RQ15722 352 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 SLC25A35Q3KQZ1 300 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 METTL21CQ5VZV1 264 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 RUSC1-AS1Q66K80 236 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 BAIAP2L2Q6UXY1 529 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 LYG2Q86SG7 212 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 ZADH2Q8N4Q0 377 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 NUP37Q8NFH4 326 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 OR51Q1Q8NH59 317 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 OR2V1Q8NHB1 315 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 ZFAND1Q8TCF1 268 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 MAGEB18Q96M61 343 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 HIST1H4GQ99525 98 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 RIOK2Q9BVS4 552 aaKnown RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 TLNRD1Q9H1K6 362 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 LHX5Q9H2C1 402 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 PARLQ9H300 379 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 EXOSC4Q9NPD3 245 aaKnown RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 BATF3Q9NR55 127 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 FAM206AQ9NX38 181 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 MAPK8IP3Q9UPT6 1336 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 SNAPC4Q5SXM2 1469 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 TMEM131Q92545 1883 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 IGHV3OR16-13A0A075B7E8 117 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 GOLGA6L4A6NEF3 574 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 KCNK1O00180 336 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 SOCS2O14508 198 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 TAAR5O14804 337 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 ZG16O60844 167 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 RAMP2O60895 175 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 UGT2B11O75310 529 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 CNIH1O95406 144 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 PPP1R3DO95685 299 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 CD5P06127 495 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 EIF4EP06730 217 aaKnown RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 CD38P28907 300 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 BTCP35070 178 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 SSTR5P35346 364 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 TCL1AP56279 114 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 PSME3P61289 254 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 ZNF763Q0D2J5 394 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 KRR1Q13601 381 aaKnown RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 FHL1Q13642 323 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 PRSS8Q16651 343 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 PAGE3Q5JUK9 113 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 FAM131AQ6UXB0 335 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 GDPGP1Q6ZNW5 385 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 THOC6Q86W42 341 aaKnown RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 CDC20BQ86Y33 519 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 OR10G3Q8NGC4 313 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 OR2D3Q8NGH3 330 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 CCDC26Q8TAB7 109 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 STOML3Q8TAV4 291 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 DDIT4LQ96D03 193 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 C18orf12Q96KH6 178 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 PGLYRP3Q96LB9 341 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 TEAD3Q99594 435 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 DOK1Q99704 481 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 HOPXQ9BPY8 73 aaPredicted RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 SLC22A4Q9H015 551 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 MS4A6AQ9H2W1 248 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 TRABDQ9H4I3 376 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 XCL2Q9UBD3 114 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 SLC7A11Q9UPY5 501 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 KCNE3Q9Y6H6 103 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 GON4LQ3T8J9 2241 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 NACADO15069 1562 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 TGIF2-C20orf24A0A0A6YYL0 155 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 A0A0B4J2A0 478 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 DAPL1A0PJW8 107 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 DHRS7CA6NNS2 312 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 F5H5K5 113 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 LINC01619G3V211 115 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 K7N7A8 449 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 PSMD12O00232 456 aaPredicted RBP3.16□□□□□ -1.9
SKP1-209ENST00000522552 NTN3O00634 580 aaPredicted RBP3.16□□□□□ -1.9
SKP1-209ENST00000522552 UBDO15205 165 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 FAM189A1O60320 539 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 SNAP91O60641 907 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 NUDT3O95989 172 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 SEMG1P04279 462 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 HMGN1P05114 100 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 SNRPAP09012 282 aaKnown RBP3.16□□□□□ -1.9
SKP1-209ENST00000522552 OR8U8P0C7N1 319 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 LAMP1P11279 417 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 AQP1P29972 269 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 RPL12P30050 165 aaKnown RBP3.16□□□□□ -1.9
SKP1-209ENST00000522552 IL2RGP31785 369 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 MYCNOSP40205 109 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 VDAC2P45880 294 aaPredicted RBP3.16□□□□□ -1.9
SKP1-209ENST00000522552 SELENOTP62341 195 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 SKP2Q13309 424 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 PTGES3Q15185 160 aaKnown RBP3.16□□□□□ -1.9
SKP1-209ENST00000522552 LRRC26Q2I0M4 334 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 SYT6Q5T7P8 510 aaPredicted RBP3.16□□□□□ -1.9
SKP1-209ENST00000522552 SLC35E4Q6ICL7 350 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 SYCE2Q6PIF2 218 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 ZNF620Q6ZNG0 422 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms