RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 A0A087WUU8 490 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 A0A1W2PR80 420 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 A0A1W2PRG6 482 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 A0A1W2PRQ8 180 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 DPRXA6NFQ7 191 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 EFCAB9A8MZ26 197 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 RPL36A-HNRNPH2H7BZ11 118 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 CLOCKO15516 846 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 PDE5AO76074 875 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 DIRAS1O95057 198 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 IGKV3-20P01619 116 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 IGHV2-70P01814 119 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 RAF1P04049 648 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 SAGP10523 405 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-208ENST00000520228 GLIPR1P48060 266 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 CSNK1A1P48729 337 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 DAP3P51398 398 aaKnown RBP5.84□□□□□ -1.47
SDCBP-208ENST00000520228 IST1P53990 364 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 SH3BGRP55822 239 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-208ENST00000520228 SMIM11AP58511 58 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 UBE2NP61088 152 aaKnown RBP5.84□□□□□ -1.47
SDCBP-208ENST00000520228 VLDLRP98155 873 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 PRKCDQ05655 676 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 RPL18Q07020 188 aaKnown RBP5.84□□□□□ -1.47
SDCBP-208ENST00000520228 BSPH1Q075Z2 132 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 CAMK2DQ13557 499 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 DGCR6Q14129 220 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 ACKR1Q16570 336 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 CEACAM16Q2WEN9 425 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 FGD3Q5JSP0 725 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 NCMAPQ5T1S8 102 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 C1QTNF12Q5T7M4 302 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 CST9LP1Q5W188 147 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 KRT80Q6KB66 452 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 PODNL1Q6PEZ8 512 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 PAMR1Q6UXH9 720 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 MBOAT2Q6ZWT7 520 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 OAFQ86UD1 273 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 ZNF329Q86UD4 541 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 DHFR2Q86XF0 187 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 MEX3DQ86XN8 651 aaKnown RBP5.84□□□□□ -1.47
SDCBP-208ENST00000520228 MAPKAPK5-AS1Q8N8E1 139 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 OR1K1Q8NGR3 316 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 OR51A7Q8NH64 312 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 OR6X1Q8NH79 312 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 SLC7A13Q8TCU3 470 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 SSMEM1Q8WWF3 244 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 LIPHQ8WWY8 451 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 BCL2L2Q92843 193 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-208ENST00000520228 SLC25A44Q96H78 314 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-208ENST00000520228 THTPAQ9BU02 230 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 ULBP2Q9BZM5 246 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 C1orf21Q9H246 121 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 ANKRD19PQ9H560 264 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 INIPQ9NRY2 104 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 ACTR3BQ9P1U1 418 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 PRPF19Q9UMS4 504 aaKnown RBP5.84□□□□□ -1.47
SDCBP-208ENST00000520228 RNF115Q9Y4L5 304 aa5.84□□□□□ -1.47
SDCBP-208ENST00000520228 HEATR5AQ86XA9 2040 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 IGLV9-49A0A0B4J1Y8 123 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF99A8MXY4 864 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-208ENST00000520228 M0R1B8 84 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 GYG2O15488 501 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 STAMBPO95630 424 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 IGHG1P01857 330 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 AMBPP02760 352 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 SEMG1P04279 462 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 FABP3P05413 133 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 TSPAN19P0C672 248 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 SMIM18P0DKX4 95 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 ATP6V1B2P21281 511 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 PAX7P23759 505 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 PTAFRP25105 342 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 GPR4P46093 362 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 RAD23AP54725 363 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 MS4A2Q01362 244 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 SPIBQ01892 262 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 IQCCQ4KMZ1 466 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 DNAL1Q4LDG9 190 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 PHYHD1Q5SRE7 291 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 LCN8Q6JVE9 175 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 ADAM5Q6NVV9 412 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 HDDC2Q7Z4H3 204 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 ZDHHC21Q8IVQ6 265 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 WDFY1Q8IWB7 410 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 CCDC36Q8IYA8 594 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 OR13C2Q8NGS9 318 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 OR52J3Q8NH60 311 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 MAGEE2Q8TD90 523 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-208ENST00000520228 POP5Q969H6 163 aaKnown RBP5.83□□□□□ -1.48
SDCBP-208ENST00000520228 TMEM54Q969K7 222 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 CCDC124Q96CT7 223 aaKnown RBP5.83□□□□□ -1.48
SDCBP-208ENST00000520228 RADILQ96JH8 1075 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 TNFRSF13CQ96RJ3 184 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 NDEL1Q9GZM8 345 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 IL1RAPQ9NPH3 570 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 GLTPQ9NZD2 209 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 MGAT4BQ9UQ53 548 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 POFUT2Q9Y2G5 429 aa5.83□□□□□ -1.48
SDCBP-208ENST00000520228 MED12LQ86YW9 2145 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms