RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ASH2LQ9UBL3 628 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 ZNF69Q9UC07 566 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 MLXQ9UH92 298 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 TINAGQ9UJW2 476 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 NXT1Q9UKK6 140 aaKnown RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 PCDHB10Q9UN67 800 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 EDARQ9UNE0 448 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 EMC9Q9Y3B6 208 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 EML6Q6ZMW3 1958 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 RANBP2P49792 3224 aaKnown RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 TRAV14DV4A0A0A6YYC5 116 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 A0A0B4J2A0 478 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 IGHV5-10-1A0A0J9YXX1 117 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 TRBV11-1A0A0K0K1C0 115 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 TMEM269A0A1B0GVZ9 245 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 A0A1W2PPL8 197 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 A0A1W2PQM1 296 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 hCG_1807616A0A1W2PRN6 198 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 MFSD2BA6NFX1 497 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 AQP7P3A6NL99 342 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 FOXI3A8MTJ6 420 aaPredicted RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 DISC1C4P0D8 188 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 ZNF878C9JN71 531 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 AGRPO00253 132 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 DNPH1O43598 174 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 RP2O75695 350 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 MPZL1O95297 269 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 CYB5AP00167 134 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 IGHG1P01857 330 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 CRYABP02511 175 aaKnown RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 NMBP08949 121 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 H2BFMP0C1H6 154 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 OR4E1P0C645 316 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 UBBP0CG47 229 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 PRF1P14222 555 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 ZBTB25P24278 435 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 AGTR1P30556 359 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 CXCL12P48061 93 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 ZNF41P51814 821 aaPredicted RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 SUCLG1P53597 346 aaKnown RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 EMP2P54851 167 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 CLDN6P56747 220 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 CD81P60033 236 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 GMFBP60983 142 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 LSM6P62312 80 aaKnown RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 POU3F1Q03052 451 aaPredicted RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 FMODQ06828 376 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 MYBPHQ13203 477 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 UNC119Q13432 240 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 TRA2AQ13595 282 aaKnown RBP eCLIP4.45□□□□□ -1.7
SDC2-204ENST00000519914 UBXN2BQ14CS0 331 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 PCOLCEQ15113 449 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 C2orf68Q2NKX9 166 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 EIF2S3LQ2VIR3 472 aaKnown RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 RNF212Q495C1 297 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 CDNFQ49AH0 187 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 ACTBL2Q562R1 376 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 VAX1Q5SQQ9 334 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 OR5M10Q6IEU7 315 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 FAAP20Q6NZ36 180 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 KLHL24Q6TFL4 600 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 TMUB2Q71RG4 321 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 RAB11FIP2Q7L804 512 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 HSD17B13Q7Z5P4 300 aaPredicted RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 UEVLDQ8IX04 471 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 OR5AS1Q8N127 324 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 OR8H3Q8N146 312 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 GTPBP8Q8N3Z3 284 aaPredicted RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 GALNT16Q8N428 558 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 C12orf45Q8N5I9 185 aaPredicted RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 SLC38A9Q8NBW4 561 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 OR4D6Q8NGJ1 314 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 OR52B4Q8NGK2 314 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 OR5D14Q8NGL3 314 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 SAP25Q8TEE9 199 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 NAT6Q93015 286 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 TMEM54Q969K7 222 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 FBXW5Q969U6 566 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 PPP1R14AQ96A00 147 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 C10orf35Q96D05 121 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 SPACA9Q96E40 222 aaPredicted RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 ELMOD3Q96FG2 381 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 C1orf147Q96MC9 270 aaPredicted RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 C8orf49Q96NF6 230 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 OXGR1Q96P68 337 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 SMAD5Q99717 465 aaKnown RBP4.45□□□□□ -1.7
SDC2-204ENST00000519914 PBOV1Q9GZY1 135 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 DNTTIP1Q9H147 329 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 OR51M1Q9H341 326 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 OPA3Q9H6K4 179 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 EXO5Q9H790 373 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 BEX1Q9HBH7 125 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 COA4Q9NYJ1 87 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 MED11Q9P086 117 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 PPP4R1LQ9P1A2 415 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 GHRLQ9UBU3 117 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 SHPKQ9UHJ6 478 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 PFDN2Q9UHV9 154 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 KLK13Q9UKR3 277 aa4.45□□□□□ -1.7
SDC2-204ENST00000519914 RARRES3Q9UL19 164 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms