RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 TNFRSF11BO00300 401 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 CRXO43186 299 aaPredicted RBP4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 CTSLP07711 333 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 CSF3P09919 207 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 HOXB6P17509 224 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 GTF2H1P32780 548 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 GNG10P50151 68 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 SERPINB9P50453 376 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 RAB38P57729 211 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 POLR2GP62487 172 aaKnown RBP eCLIP4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 MRPS25P82663 173 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 C2orf54Q08AI8 447 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 KIAA0087Q14695 138 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 PRR4Q16378 134 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 CEACAM21Q3KPI0 293 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 THOC7Q6I9Y2 204 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 ZNF613Q6PF04 617 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 ZNF589Q86UQ0 364 aaPredicted RBP4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 C11orf72Q8NBR9 251 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 OR4K17Q8NGC6 315 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 ZFP90Q8TF47 636 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 GEMIN6Q8WXD5 167 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 HGDQ93099 445 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 IL22RA2Q969J5 263 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 RPUSD4Q96CM3 377 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 LRRC58Q96CX6 371 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 SMIM19Q96E16 107 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 FAM19A4Q96LR4 140 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 ZNF599Q96NL3 588 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 OR5M11Q96RB7 305 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 APOL4Q9BPW4 351 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 NUDT9Q9BW91 350 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 CDCA4Q9BXL8 241 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 SLIRPQ9GZT3 109 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 ISG20L2Q9H9L3 353 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 RGS18Q9NS28 235 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 AIG1Q9NVV5 245 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 VAX2Q9UIW0 290 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 SLC22A13Q9Y226 551 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 ADAMTSL3P82987 1691 aa4.28□□□□□ -1.72
CTNNA1-202ENST00000517533 RB1CC1Q8TDY2 1594 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 TINCRA0A1B0GVN0 87 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 FABP7O15540 132 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 SYNGR1O43759 233 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 TBL1XO60907 577 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 KBTBD11O94819 623 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 KLF8O95600 359 aaPredicted RBP4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 TCRBP04435 133 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 CCDC166P0CW27 439 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 PGAM2P15259 253 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 F2RP25116 425 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 G0S2P27469 103 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 RPA3P35244 121 aaPredicted RBP4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 GGT2P36268 569 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 NDUFA8P51970 172 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 DLX6P56179 175 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 CXCL6P80162 114 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 CD47Q08722 323 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 PPIDQ08752 370 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 EGFEM1PQ0D2K5 195 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 NAB1Q13506 487 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 OR1Q1Q15612 314 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 ACSM3Q53FZ2 586 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 ZNF497Q6ZNH5 498 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 Q6ZTC4 211 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 PEX26Q7Z412 305 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 OAFQ86UD1 273 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 C10orf107Q8IVU9 208 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 C10orf67Q8IYJ2 551 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 GPR26Q8NDV2 337 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 MRAP2Q96G30 205 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 KCTD7Q96MP8 289 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 TAAR1Q96RJ0 339 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 ZNF184Q99676 751 aaPredicted RBP4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 UGT2B28Q9BY64 529 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 ARL6Q9H0F7 186 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 MFSD1Q9H3U5 465 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 TMEM100Q9NV29 134 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 SIGLEC9Q9Y336 463 aa4.27□□□□□ -1.73
CTNNA1-202ENST00000517533 IGHV3-35A0A0C4DH35 117 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 M0R036 132 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 CXCR6O00574 342 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 XKRYO14609 159 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 KMOO15229 486 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 ASS1P00966 412 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 IGKV5-2P06315 115 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 GNAO1P09471 354 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 PAX6P26367 422 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 HTR1DP28221 377 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 NCBP2P52298 156 aaKnown RBP eCLIP4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 RPS23P62266 143 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 PRR3P79522 188 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 C4orf26Q17RF5 130 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 ZNF630Q2M218 657 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 C2CD6Q53TS8 623 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 SYPL2Q5VXT5 272 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 TEX43Q6ZNM6 134 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 TMEM61Q8N0U2 210 aa4.26□□□□□ -1.73
CTNNA1-202ENST00000517533 PIFOQ8TCI5 191 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms