RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 OR52I2Q8NH67 350 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 CLDN23Q96B33 292 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 JAM3Q9BX67 310 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 OR51I2Q9H344 312 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 ID4P47928 161 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 EGR3Q06889 387 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 LHX8Q68G74 356 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 FAAP20Q6NZ36 180 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 THSD4Q6ZMP0 1018 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 TTC9Q92623 222 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 SIGLEC11Q96RL6 698 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 VN1R1Q9GZP7 353 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 RPL7P18124 248 aaKnown RBP9.91□□□□□ -0.82
TRIM41-209ENST00000515834 TMEM56Q96MV1 263 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 RYDENQ9NUL5 291 aaKnown RBP9.91□□□□□ -0.82
TRIM41-209ENST00000515834 H3BP45 60 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 TMPRSS2O15393 492 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 KRASP01116 189 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 FZD5Q13467 585 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 FCN2Q15485 313 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 SYT6Q5T7P8 510 aaPredicted RBP9.91□□□□□ -0.82
TRIM41-209ENST00000515834 UBE3DQ7Z6J8 389 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 OR4F17Q8NGA8 305 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 BCL2L2Q92843 193 aaPredicted RBP9.91□□□□□ -0.82
TRIM41-209ENST00000515834 MYEOVQ96EZ4 313 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 DUS3LQ96G46 650 aaKnown RBP9.91□□□□□ -0.82
TRIM41-209ENST00000515834 OR5V1Q9UGF6 321 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 AUP1Q9Y679 476 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 TRDV1A0A1B0GX56 115 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 TMEM200CA6NKL6 621 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 RNF224P0DH78 156 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 B3GNTL1Q67FW5 361 aaPredicted RBP9.91□□□□□ -0.82
TRIM41-209ENST00000515834 OR13G1Q8NGZ3 307 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 LILRB1Q8NHL6 650 aaPredicted RBP9.91□□□□□ -0.82
TRIM41-209ENST00000515834 CIB3Q96Q77 187 aaPredicted RBP9.91□□□□□ -0.82
TRIM41-209ENST00000515834 SLC25A22Q9H936 323 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 GAR1Q9NY12 217 aaKnown RBP9.91□□□□□ -0.82
TRIM41-209ENST00000515834 KCNMB2Q9Y691 235 aa9.91□□□□□ -0.82
TRIM41-209ENST00000515834 CHD2O14647 1828 aaKnown RBP9.91□□□□□ -0.82
TRIM41-209ENST00000515834 RNASEK-C17orf49H0YIS7 233 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 ATF1P18846 271 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 LGALS7P47929 136 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 NOVP48745 357 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 TCTN1Q2MV58 587 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 ACSM5Q6NUN0 579 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 ZNF793Q6ZN11 406 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 SLC24A4Q8NFF2 622 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 OR10D3Q8NH80 312 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 DPH3Q96FX2 82 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 CHODLQ9H9P2 273 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 PSG11Q9UQ72 335 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 A0A087WV62 115 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 IGHV1OR15-9A0A0B4J2B8 117 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 MGMTP16455 207 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 C16orf47Q6ZP98 133 aaPredicted RBP9.9□□□□□ -0.82
TRIM41-209ENST00000515834 CCDC190Q86UF4 302 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 DOK5Q9P104 306 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 NGFP01138 241 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 CXCL10P02778 98 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 ZNF17P17021 662 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 PPP1CBP62140 327 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 SLC17A1Q14916 467 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 LHX4Q969G2 390 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 PKMYT1Q99640 499 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 FBXO34Q9NWN3 711 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 FER1L6Q2WGJ9 1857 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 PDGFBP01127 241 aaPredicted RBP9.9□□□□□ -0.82
TRIM41-209ENST00000515834 FBP1P09467 338 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 SCGB1C2P0DMR2 95 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 CNN1P51911 297 aaKnown RBP9.9□□□□□ -0.82
TRIM41-209ENST00000515834 AQP6Q13520 282 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 ZNF787Q6DD87 383 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 C19orf48Q6RUI8 117 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 TMUB2Q71RG4 321 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 RASL11BQ9BPW5 248 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 CMC2Q9NRP2 79 aa9.9□□□□□ -0.82
TRIM41-209ENST00000515834 DCTN6O00399 190 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 MMP7P09237 267 aaPredicted RBP9.9□□□□□ -0.83
TRIM41-209ENST00000515834 OR5H8P0DN80 308 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 BSGP35613 385 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 PPP1CAP62136 330 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 SNRPNP63162 240 aaKnown RBP9.9□□□□□ -0.83
TRIM41-209ENST00000515834 C20orf196Q8IYI0 205 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 PHYHIPQ92561 330 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 PCOLCE2Q9UKZ9 415 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 RP1L1Q8IWN7 2480 aaPredicted RBP9.9□□□□□ -0.83
TRIM41-209ENST00000515834 PTPRZ1P23471 2315 aaPredicted RBP9.9□□□□□ -0.83
TRIM41-209ENST00000515834 A0A087WUJ7 227 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 CEACAM3P40198 252 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 UBE2MP61081 183 aaKnown RBP9.9□□□□□ -0.83
TRIM41-209ENST00000515834 GNG3P63215 75 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 LRRTM1Q86UE6 522 aa9.9□□□□□ -0.83
TRIM41-209ENST00000515834 KTI12Q96EK9 354 aaPredicted RBP9.9□□□□□ -0.83
TRIM41-209ENST00000515834 C11orf54Q9H0W9 315 aaPredicted RBP9.9□□□□□ -0.83
TRIM41-209ENST00000515834 PPP5D1E7EU14 171 aa9.89□□□□□ -0.83
TRIM41-209ENST00000515834 LINC01387J3KSC0 135 aa9.89□□□□□ -0.83
TRIM41-209ENST00000515834 HAX1O00165 279 aa9.89□□□□□ -0.83
TRIM41-209ENST00000515834 DUS4LO95620 317 aaKnown RBP9.89□□□□□ -0.83
TRIM41-209ENST00000515834 MPGP29372 298 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms