RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MEDAGQ5VYS4 303 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 IL17RELQ6ZVW7 336 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 NLRC3Q7RTR2 1065 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 GALNT4Q8N4A0 578 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 CBR4Q8N4T8 237 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 OR51G2Q8NGK0 314 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 OR2T27Q8NH04 317 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 ITPKCQ96DU7 683 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 LYZL4Q96KX0 146 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 TMEM246Q9BRR3 403 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 PBOV1Q9GZY1 135 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 TLNRD1Q9H1K6 362 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 RNPEPL1Q9HAU8 725 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 UFSP2Q9NUQ7 469 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLCN3-210ENST00000515420 RHBDD3Q9Y3P4 386 aa10.71□□□□□ -0.69
CLCN3-210ENST00000515420 IGHV3-64DA0A0J9YX35 117 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 TMEM210A6NLX4 147 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 LGALS8O00214 317 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 NDUFA2O43678 99 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 SULT1C4O75897 302 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 RPS2P15880 293 aaKnown RBP10.7□□□□□ -0.7
CLCN3-210ENST00000515420 ACKR3P25106 362 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 LCN2P80188 198 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 HNRNPA0Q13151 305 aaKnown RBP10.7□□□□□ -0.7
CLCN3-210ENST00000515420 OCLNQ16625 522 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 ZSCAN26Q16670 478 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 FAHD2BQ6P2I3 314 aaPredicted RBP10.7□□□□□ -0.7
CLCN3-210ENST00000515420 ZBTB49Q6ZSB9 765 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 OR1M1Q8NGA1 313 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 DVL3Q92997 716 aaPredicted RBP10.7□□□□□ -0.7
CLCN3-210ENST00000515420 STMN2Q93045 179 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 EME1Q96AY2 570 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 NEIL1Q96FI4 390 aaPredicted RBP10.7□□□□□ -0.7
CLCN3-210ENST00000515420 FAHD2AQ96GK7 314 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 MICU1Q9BPX6 476 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 RTL8AQ9BWD3 113 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 SSBP3Q9BWW4 388 aaPredicted RBP10.7□□□□□ -0.7
CLCN3-210ENST00000515420 TMPRSS13Q9BYE2 586 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 R4GMQ9 66 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 CUBNO60494 3623 aa10.7□□□□□ -0.7
CLCN3-210ENST00000515420 TRAV38-1A0A0B4J264 116 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 ZNF816-ZNF321PA0A0X1KG74 233 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 A6NLC8 198 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 SNTNA6NMZ2 147 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 DHRS7CA6NNS2 312 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 LOC110117498-PIK3R3F6TDL0 507 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 PSMD9O00233 223 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 MPZL2O60487 215 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 MTRF1O75570 445 aaKnown RBP10.69□□□□□ -0.7
CLCN3-210ENST00000515420 LHBP01229 141 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 TTRP02766 147 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 KRT8P05787 483 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 ZFP36P26651 326 aaKnown RBP10.69□□□□□ -0.7
CLCN3-210ENST00000515420 ATP6V1E1P36543 226 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 MTNR1AP48039 350 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 NPY4RP50391 375 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 ZNF154Q13106 437 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 C11orf91Q3C1V1 193 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 FAM76BQ5HYJ3 339 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 ZNF684Q5T5D7 378 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 TEX36Q5VZQ5 186 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 C1QL2Q7Z5L3 287 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 ELMOD2Q8IZ81 293 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 RFLNBQ8N5W9 214 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 OR8B3Q8NGG8 313 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 RDH12Q96NR8 316 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 OR8B2Q96RD0 313 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 APOL4Q9BPW4 351 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 C1orf123Q9NWV4 160 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 OR5V1Q9UGF6 321 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 MRM2Q9UI43 246 aaKnown RBP10.69□□□□□ -0.7
CLCN3-210ENST00000515420 SNX5Q9Y5X3 404 aa10.69□□□□□ -0.7
CLCN3-210ENST00000515420 A0A1W2PQL4 384 aaPredicted RBP10.68□□□□□ -0.7
CLCN3-210ENST00000515420 OOEPA6NGQ2 149 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 DHRS3O75911 302 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 GRPP07492 148 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 PPIAL4GP0DN37 164 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 MUC1P15941 1255 aaPredicted RBP10.68□□□□□ -0.7
CLCN3-210ENST00000515420 ZNF12P17014 697 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 RBMXP38159 391 aaKnown RBP10.68□□□□□ -0.7
CLCN3-210ENST00000515420 PSMB10P40306 273 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 PITPNBP48739 271 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 SEC61A1P61619 476 aaKnown RBP10.68□□□□□ -0.7
CLCN3-210ENST00000515420 GNB2P62879 340 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 ACTC1P68032 377 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 ACTA1P68133 377 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 MFGE8Q08431 387 aaPredicted RBP10.68□□□□□ -0.7
CLCN3-210ENST00000515420 RIPPLY1Q0D2K3 151 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 PRDX4Q13162 271 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 FAM201AQ5SY85 155 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 BCL2L15Q5TBC7 163 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 PLEKHG7Q6ZR37 379 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 C1orf229Q6ZS94 237 aaPredicted RBP10.68□□□□□ -0.7
CLCN3-210ENST00000515420 Q6ZSR3 168 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 ZNF771Q7L3S4 317 aaPredicted RBP10.68□□□□□ -0.7
CLCN3-210ENST00000515420 SSX6Q7RTT6 188 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 WDR86Q86TI4 376 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 C11orf53Q8IXP5 236 aa10.68□□□□□ -0.7
CLCN3-210ENST00000515420 ZDHHC23Q8IYP9 409 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms