RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 NXT1Q9UKK6 140 aaKnown RBP12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 UBE2J1Q9Y385 318 aaPredicted RBP12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 A0A1W2PP11 408 aa12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 BLACEA4D250 179 aa12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 EFSO43281 561 aa12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 ZNF205O95201 554 aa12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 NME1P15531 152 aaKnown RBP12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 FCARP24071 287 aa12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 OR3A4PP47883 348 aa12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 RPS4XP62701 263 aaKnown RBP12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 CLCC1Q96S66 551 aa12.38□□□□□ -0.43
TSPAN17-208ENST00000514705 BRCA2P51587 3418 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 TGFBR3LH3BV60 316 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 MIDNQ504T8 468 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 PRSS54Q6PEW0 395 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 EIF4E3Q8N5X7 224 aaKnown RBP12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 LILRB1Q8NHL6 650 aaPredicted RBP12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 GLYATL2Q8WU03 294 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 ADAT3Q96EY9 351 aaPredicted RBP12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 NRIP2Q9BQI9 281 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 UTP23Q9BRU9 249 aaKnown RBP12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 AMDHD2Q9Y303 409 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 JTBO76095 146 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 SFT2D2O95562 160 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 JMJD7P0C870 316 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 TMEM176BQ3YBM2 270 aaPredicted RBP12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 TMEM92Q6UXU6 159 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 LINC00114Q6XXX2 140 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 OR2I1PQ8NGU4 316 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 SEC11CQ9BY50 192 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 hCG_1809904A0A1W2PP81 198 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 A0A1W2PR64 198 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 A0A1W2PRV1 198 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 RAB27BO00194 218 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 LINC00271P0C7V0 271 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 CCNOP22674 350 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 TUBG1P23258 451 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 FOXL2P58012 376 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 FUT7Q11130 342 aa12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 KIAA0141Q14154 515 aaPredicted RBP12.37□□□□□ -0.43
TSPAN17-208ENST00000514705 A6NLC8 198 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 HSPA12AO43301 675 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 DUX1O43812 170 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 CD8AP01732 235 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 DUSP3P51452 185 aaPredicted RBP12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 ZNF561Q8N587 486 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 OR5L1Q8NGL2 311 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 OR14K1Q8NGZ2 314 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 NOTCH4Q99466 2003 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 NXPH3O95157 252 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 S100A8P05109 93 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 ABCD3P28288 659 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 AFF3P51826 1226 aaKnown RBP12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 MTCP1P56278 107 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 ZNF121P58317 390 aaPredicted RBP12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 GABRG3Q99928 467 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 FBXL17Q9UF56 701 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 FRG2CA6NGY1 282 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 MSGN1A6NI15 193 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 PLPP3O14495 311 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 HIST1H1DP16402 221 aaKnown RBP12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 TBPP20226 339 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 KIR2DL1P43626 348 aaPredicted RBP12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 FHL1Q13642 323 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 TMEM182Q6ZP80 229 aaPredicted RBP12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 ARRDC1Q8N5I2 433 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 ZSCAN4Q8NAM6 433 aaPredicted RBP12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 A0A1W2PPH5 198 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 H7C1Q1 480 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 BGLAPP02818 100 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 IL11P20809 199 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 CHATP28329 748 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 TMEM104Q8NE00 496 aa12.36□□□□□ -0.43
TSPAN17-208ENST00000514705 IGHV5-51A0A0C4DH38 117 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 LOC101059948A0A1B0GTJ6 334 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 NPIPA2E9PIF3 369 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 NPIPA3F8WFD2 350 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 RAD51DO75771 328 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 CD37P11049 281 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 BCKDHBP21953 392 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 LTBRP36941 435 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 CCR5P51681 352 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 TGIF1Q15583 401 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 RABEPKQ7Z6M1 372 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 CHST11Q9NPF2 352 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 PCOLCE2Q9UKZ9 415 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 SDK2Q58EX2 2172 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 RER1O15258 196 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 GSTP1P09211 210 aaKnown RBP12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 NAT2P11245 290 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 UBE2KP61086 200 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 TAF9Q16594 264 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 ZNF260Q3ZCT1 412 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 PRAMEF20Q5VT98 475 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 TMEM217Q8N7C4 229 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 SYT3Q9BQG1 590 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 RAB18Q9NP72 206 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 MMP24Q9Y5R2 645 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 ASXL3Q9C0F0 2248 aa12.35□□□□□ -0.43
TSPAN17-208ENST00000514705 TAAR5O14804 337 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms