RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 OR2T2Q6IF00 324 aa17.2■□□□□ 0.34
USP53-208ENST00000514305 CLEC2AQ6UVW9 174 aa17.2■□□□□ 0.34
USP53-208ENST00000514305 DNM1P46Q6ZS02 220 aa17.2■□□□□ 0.34
USP53-208ENST00000514305 KLBQ86Z14 1044 aa17.2■□□□□ 0.34
USP53-208ENST00000514305 OR8G5Q8NG78 346 aa17.2■□□□□ 0.34
USP53-208ENST00000514305 OR13G1Q8NGZ3 307 aa17.2■□□□□ 0.34
USP53-208ENST00000514305 OR2AE1Q8NHA4 323 aa17.2■□□□□ 0.34
USP53-208ENST00000514305 OR51E1Q8TCB6 317 aa17.2■□□□□ 0.34
USP53-208ENST00000514305 NR1H4Q96RI1 486 aaPredicted RBP17.2■□□□□ 0.34
USP53-208ENST00000514305 ABCB9Q9NP78 766 aa17.2■□□□□ 0.34
USP53-208ENST00000514305 TMEM100Q9NV29 134 aa17.2■□□□□ 0.34
USP53-208ENST00000514305 PAK1IP1Q9NWT1 392 aaPredicted RBP17.2■□□□□ 0.34
USP53-208ENST00000514305 DHRS7CA6NNS2 312 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 CD300LBA8K4G0 201 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 SYT7O43581 403 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 DHRS3O75911 302 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 CLPTM1O96005 669 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 TTRP02766 147 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 MT-ND2P03891 347 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 ISG15P05161 165 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 ZNF81P51508 661 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 FAM3AP98173 230 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 ACSM1Q08AH1 577 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 RIPPLY1Q0D2K3 151 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 MED22Q15528 200 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 TBCEQ15813 527 aaPredicted RBP17.19■□□□□ 0.34
USP53-208ENST00000514305 PCGF3Q3KNV8 242 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 WDR38Q5JTN6 314 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 ZBTB37Q5TC79 503 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 C11orf71Q6IPW1 123 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 LRP11Q86VZ4 500 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 SPERTQ8NA61 448 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 SEMA6DQ8NFY4 1073 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 OR5AK2Q8NH90 309 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 FCGR1BQ92637 280 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 C10orf35Q96D05 121 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 POFUT1Q9H488 388 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 VCX3AQ9NNX9 186 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 ISYNA1Q9NPH2 558 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 GPR84Q9NQS5 396 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 MRPL15Q9P015 296 aaKnown RBP17.19■□□□□ 0.34
USP53-208ENST00000514305 FRRS1LQ9P0K9 344 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 SLC22A13Q9Y226 551 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 ABCA1O95477 2261 aa17.19■□□□□ 0.34
USP53-208ENST00000514305 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.18■□□□□ 0.34
USP53-208ENST00000514305 hCG_38984A0A1B0GV85 526 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 CD5LO43866 347 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 GNALP38405 381 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 GSK3AP49840 483 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 DSCR9P59020 149 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 IRF3Q14653 427 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 MST1LQ2TV78 715 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 THRSPQ92748 146 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 HPS1Q92902 700 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 FAM71F1Q96KD3 344 aaPredicted RBP17.18■□□□□ 0.34
USP53-208ENST00000514305 VRK1Q99986 396 aaPredicted RBP17.18■□□□□ 0.34
USP53-208ENST00000514305 PLEKHA1Q9HB21 404 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 YAE1D1Q9NRH1 226 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 ZNF319Q9P2F9 582 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 HHLA2Q9UM44 414 aa17.18■□□□□ 0.34
USP53-208ENST00000514305 H7C417 338 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 OGG1O15527 345 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 SERPINA3P01011 423 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 CD1AP06126 327 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 ACHEP22303 614 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 CDK5R1Q15078 307 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 OR8B8Q15620 311 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 ZNF773Q6PK81 442 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 OR5AS1Q8N127 324 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 PRSS35Q8N3Z0 413 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 NEU4Q8WWR8 484 aaPredicted RBP17.17■□□□□ 0.34
USP53-208ENST00000514305 SMIM19Q96E16 107 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 HIST1H2AAQ96QV6 131 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 MDFIQ99750 246 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 EGLN1Q9GZT9 426 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 NEK6Q9HC98 313 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 NKIRAS2Q9NYR9 191 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 ENPP5Q9UJA9 477 aa17.17■□□□□ 0.34
USP53-208ENST00000514305 SONP18583 2426 aaKnown RBP17.17■□□□□ 0.34
USP53-208ENST00000514305 IGHV4-30-2A0A087WSY4 118 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 A0A087WXM4 84 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 C17orf100A8MU93 164 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 P2RY10O00398 339 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 GMDSO60547 372 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 IGLV3-1P01715 115 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 ADRA2AP08913 450 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 ALDH3B1P43353 468 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 CDH15P55291 814 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 GPR50Q13585 617 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 MSMPQ1L6U9 139 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 ZNF367Q7RTV3 350 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 OR56B2PQ8NGI1 322 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 UFD1Q92890 307 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 DECR2Q9NUI1 292 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 MPC1Q9Y5U8 109 aa17.16■□□□□ 0.34
USP53-208ENST00000514305 RTTNQ86VV8 2226 aa17.15■□□□□ 0.34
USP53-208ENST00000514305 ZNF816-ZNF321PA0A0X1KG74 233 aa17.15■□□□□ 0.34
USP53-208ENST00000514305 ANXA2P2A6NMY6 339 aa17.15■□□□□ 0.34
USP53-208ENST00000514305 OR4C45A6NMZ5 311 aa17.15■□□□□ 0.34
USP53-208ENST00000514305 CCL1P22362 96 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms