RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LOC100509620A0A075B734 347 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 RNF103-CHMP3A0A140T963 221 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 PRSS51A0A1B0GVH4 220 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 EXOC1LA0A1B0GW35 172 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 A0A1B0GWJ7 208 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 C5orf49A4QMS7 147 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 H3BUX3 64 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 NPFFO15130 113 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 LDLRAD4O15165 306 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 HPRP00739 348 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 MT-ATP6P00846 226 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 CLEC3BP05452 202 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 INHBAP08476 426 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 CCDC159P0C7I6 412 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 COX5BP10606 129 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 HLA-DOBP13765 273 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 ETFAP13804 333 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 NQO1P15559 274 aaKnown RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 NCF2P19878 526 aaPredicted RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 EFNA1P20827 205 aaPredicted RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC6A1P30531 599 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 HOXD3P31249 432 aaPredicted RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 DCTDP32321 178 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 RPL4P36578 427 aaKnown RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 WNT5AP41221 380 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 RGS6P49758 472 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF133P52736 654 aaPredicted RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 DNAJB13P59910 316 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 PCBD1P61457 104 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 MRPS34P82930 218 aaKnown RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 HSF2Q03933 536 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 PUDPQ08623 228 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 C2orf54Q08AI8 447 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 TBCEQ15813 527 aaPredicted RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 UAP1Q16222 522 aaPredicted RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 SMU1Q2TAY7 513 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 PABPC1L2AQ5JQF8 200 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 TMEM255AQ5JRV8 349 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 MRPL2Q5T653 305 aaKnown RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 FAM27BQ5VT28 67 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 ANXA8L1Q5VT79 327 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 CARD17Q5XLA6 110 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 FAM91A1Q658Y4 838 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 LYPD2Q6UXB3 125 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 TIFABQ6ZNK6 161 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 Q6ZR03 302 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 MOB3CQ70IA8 216 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 KLHL7Q8IXQ5 586 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 CADM3Q8N126 398 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 LYG1Q8N1E2 194 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 CADM2Q8N3J6 435 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 LY6G5BQ8NDX9 201 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 OR8G5Q8NG78 346 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 OR7A2PQ8NGA2 310 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 OR4K5Q8NGD3 323 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 OR8J2Q8NGG1 315 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 OR11L1Q8NGX0 322 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 OR5AK3PQ8NH89 298 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 FBXO25Q8TCJ0 367 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 DNAJA4Q8WW22 397 aaPredicted RBP2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 C4orf45Q96LM5 186 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 PPP3R2Q96LZ3 170 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 CCDC115Q96NT0 180 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 RCHY1Q96PM5 261 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 EPYCQ99645 322 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 INPP5EQ9NRR6 644 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 C20orf141Q9NUB4 165 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 CALML5Q9NZT1 146 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 TMEM216Q9P0N5 145 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 KAAG1Q9UBP8 84 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 DCDC2Q9UHG0 476 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 SNX12Q9UMY4 172 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 A4GNTQ9UNA3 340 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 IFT52Q9Y366 437 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 PAM16Q9Y3D7 125 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 TIMM10BQ9Y5J6 103 aa2.92□□□□□ -1.94
PDLIM5-218ENST00000513341 TRAV38-1A0A0B4J264 116 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 A0A0G2JPF8 293 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 MEIOCA2RUB1 952 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 GMNCA6NCL1 334 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 HNRNPCL2B2RXH8 293 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 HNRNPCL3B7ZW38 293 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 USP17L23D6RBM5 183 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 H0YHG0 523 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 HMGN4O00479 90 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 PLPP3O14495 311 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 AZIN1O14977 448 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC25A17O43808 307 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 HNRNPCL1O60812 293 aaKnown RBP2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 GLRA3O75311 464 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 GLCEO94923 617 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 NDUFB4O95168 129 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 OR6A2O95222 327 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 CYB5R3P00387 301 aaPredicted RBP2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 OPN1SWP03999 348 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 SNRPAP09012 282 aaKnown RBP2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 GKN3PP0CG01 181 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 HNRNPCL4P0DMR1 293 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 NR2C1P13056 603 aa2.91□□□□□ -1.94
PDLIM5-218ENST00000513341 SAA4P35542 130 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms