RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CCDC124Q96CT7 223 aaKnown RBP10.38□□□□□ -0.75
VEGFA-216ENST00000512683 FEVQ99581 238 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 RBM4BQ9BQ04 359 aaKnown RBP10.38□□□□□ -0.75
VEGFA-216ENST00000512683 CHID1Q9BWS9 393 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 DNTTIP1Q9H147 329 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 TOR3AQ9H497 397 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 FAM53CQ9NYF3 392 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 RPUSD1Q9UJJ7 312 aaKnown RBP10.38□□□□□ -0.75
VEGFA-216ENST00000512683 TGP01266 2768 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 BTBD17A6NE02 478 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 SLC22A31A6NKX4 558 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 ZNF593O00488 134 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-216ENST00000512683 DYNC1I1O14576 645 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 TSPAN9O75954 239 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 GRPP07492 148 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 FBP1P09467 338 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 EEF1B2P24534 225 aaKnown RBP10.37□□□□□ -0.75
VEGFA-216ENST00000512683 FMO3P31513 532 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 TGFBR2P37173 567 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 ENTPD1P49961 510 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 GRB2P62993 217 aaKnown RBP10.37□□□□□ -0.75
VEGFA-216ENST00000512683 TAF13Q15543 124 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 RUSC1-AS1Q66K80 236 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 C11orf88Q6PI97 169 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 FAM90A1Q86YD7 464 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 GALNT4Q8N4A0 578 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 FTMTQ8N4E7 242 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 SCCPDHQ8NBX0 429 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 OR10G2Q8NGC3 310 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 OR52H1Q8NGJ2 320 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 OR8S1Q8NH09 359 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 OR2AE1Q8NHA4 323 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 CANT1Q8WVQ1 401 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 TAF15Q92804 592 aaKnown RBP eCLIP10.37□□□□□ -0.75
VEGFA-216ENST00000512683 LHX4Q969G2 390 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 THTPAQ9BU02 230 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 MED20Q9H944 212 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 ABCB9Q9NP78 766 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 CMC2Q9NRP2 79 aa10.37□□□□□ -0.75
VEGFA-216ENST00000512683 ARRDC5A6NEK1 342 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 FAM183AA6NL82 134 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 A6NLC8 198 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 CST1P01037 141 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 GYPAP02724 150 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 SPARCP09486 303 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 PRKXP51817 358 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 SRSF4Q08170 494 aaKnown RBP10.36□□□□□ -0.75
VEGFA-216ENST00000512683 GK3PQ14409 553 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 GLYATL3Q5SZD4 288 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 IQCF1Q8N6M8 205 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 BOLLQ8N9W6 283 aaKnown RBP10.36□□□□□ -0.75
VEGFA-216ENST00000512683 C19orf18Q8NEA5 215 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 CSNK2A3Q8NEV1 391 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 OR5R1Q8NH85 324 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 GIPC3Q8TF64 312 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 SLAMF6Q96DU3 332 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 LRGUKQ96M69 825 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 COPS4Q9BT78 406 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 RGCCQ9H4X1 137 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 SMURF1Q9HCE7 757 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 TCF7L1Q9HCS4 588 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 TNFRSF19Q9NS68 423 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 VWFP04275 2813 aa10.36□□□□□ -0.75
VEGFA-216ENST00000512683 A0A0U1RQK1 487 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 hCG_1807616A0A1W2PRN6 198 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 DHRS12A0PJE2 317 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 AQP12BA6NM10 295 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 RIIAD1A6NNX1 92 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 ZNF878C9JN71 531 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 NDUFB3O43676 98 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 IFNGP01579 166 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 SLC2A1P11166 492 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 ZNF3P17036 446 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 TGM4P49221 684 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 HOXA4Q00056 320 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-216ENST00000512683 IL5RAQ01344 420 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 ACSM1Q08AH1 577 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 LRRC10Q5BKY1 277 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 TRPM8Q7Z2W7 1104 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 DPY19L4Q7Z388 723 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 AQP12AQ8IXF9 295 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 C11orf53Q8IXP5 236 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 HS3ST5Q8IZT8 346 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 OR56B2PQ8NGI1 322 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 OR6K6Q8NGW6 343 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 OR10Z1Q8NGY1 313 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 C8orf46Q8TAG6 207 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 SLC7A6OSQ96CW6 309 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-216ENST00000512683 MED30Q96HR3 178 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 TLNRD1Q9H1K6 362 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 RASSF4Q9H2L5 321 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 CENPMQ9NSP4 180 aa10.35□□□□□ -0.75
VEGFA-216ENST00000512683 WNK1Q9H4A3 2382 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 IGHV4-59P01825 116 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 UBE2E1P51965 193 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 KRTAP10-3P60369 221 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 FAM3AP98173 230 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 C2orf68Q2NKX9 166 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 FAM76BQ5HYJ3 339 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms