RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 A0A0B4J203 849 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 A8MXE2 369 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 ERVH48-1M5A8F1 160 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 XRCC3O43542 346 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
SCLT1-209ENST00000511426 IGLV1-44P01699 117 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 CCNOP22674 350 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 IL32P24001 234 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 ACKR3P25106 362 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 AZGP1P25311 298 aaKnown RBP13.16□□□□□ -0.3
SCLT1-209ENST00000511426 OXA1LQ15070 435 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 P2RY14Q15391 338 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 LHFPL2Q6ZUX7 228 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 WDR31Q8NA23 367 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 STEAP2Q8NFT2 490 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 CGGBP1Q9UFW8 167 aaPredicted RBP13.16□□□□□ -0.3
SCLT1-209ENST00000511426 RAB22AQ9UL26 194 aa13.16□□□□□ -0.3
SCLT1-209ENST00000511426 IGKV1-9A0A0C4DH69 117 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 A0A0G2JMP0 313 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 A0A0X1KG70 313 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 METTL21EPA6NDL7 271 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 CSF3P09919 207 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 GK2Q14410 553 aaPredicted RBP13.15□□□□□ -0.3
SCLT1-209ENST00000511426 TRIM16LQ309B1 348 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 TMEM69Q5SWH9 247 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 CDH24Q86UP0 819 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 C19orf18Q8NEA5 215 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 OR4M2Q8NGB6 313 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 DEDD2Q8WXF8 326 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 ITPKCQ96DU7 683 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 SLC7A11Q9UPY5 501 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 FRYQ5TBA9 3013 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 CFAP47Q6ZTR5 3102 aa13.15□□□□□ -0.3
SCLT1-209ENST00000511426 TMEM272A0A1B0GTI8 110 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 GMDSO60547 372 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 CST4P01036 141 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 NRASP01111 189 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 PMPCAQ10713 525 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 TNK1Q13470 666 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 ASAH1Q13510 395 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 KISS1Q15726 138 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 UBE2V2Q15819 145 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 BAK1Q16611 211 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 AWAT2Q6E213 333 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 ZNF474Q6S9Z5 364 aaPredicted RBP13.15□□□□□ -0.31
SCLT1-209ENST00000511426 FBXW12Q6X9E4 464 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 RPRMLQ8N4K4 120 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 POC5Q8NA72 575 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 OR4D6Q8NGJ1 314 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 KCNG3Q8TAE7 436 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 UBASH3BQ8TF42 649 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 RFT1Q96AA3 541 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 FREM1Q5H8C1 2179 aa13.15□□□□□ -0.31
SCLT1-209ENST00000511426 CEP295Q9C0D2 2601 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 MED19A0JLT2 244 aaPredicted RBP13.14□□□□□ -0.31
SCLT1-209ENST00000511426 GABARAPH6UMI1 98 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 CTAG2O75638 210 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 NAT2P11245 290 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 SELEP16581 610 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 WNT5AP41221 380 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 INPP1P49441 399 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 IDH3GP51553 393 aaPredicted RBP13.14□□□□□ -0.31
SCLT1-209ENST00000511426 FUT6P51993 359 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 Q6ZNX1 250 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 DCDC5Q6ZRR9 648 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 ANGPTL5Q86XS5 388 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 SMIM4Q8WVI0 70 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 MS4A3Q96HJ5 214 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 ABHD1Q96SE0 405 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 GPER1Q99527 375 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 CST11Q9H112 138 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 C14orf119Q9NWQ9 140 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 JKAMPQ9P055 326 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 TINAGQ9UJW2 476 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 MRPS28Q9Y2Q9 187 aaKnown RBP13.14□□□□□ -0.31
SCLT1-209ENST00000511426 SLC25A15Q9Y619 301 aa13.14□□□□□ -0.31
SCLT1-209ENST00000511426 A0A0G2JNJ9 132 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 A0A1W2PQ09 198 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 GGT3PA6NGU5 568 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 A6NIN4 97 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 TMEM14DPA8MWL7 114 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 SMPD2O60906 423 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 ZNF780AO75290 641 aaPredicted RBP13.13□□□□□ -0.31
SCLT1-209ENST00000511426 RAD52P43351 418 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 RBP2P50120 134 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 QRFPP83859 136 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 GPR176Q14439 515 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 PRR30Q53SZ7 412 aaPredicted RBP13.13□□□□□ -0.31
SCLT1-209ENST00000511426 CENPSQ8N2Z9 138 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 RND1Q92730 232 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 MUCL1Q96DR8 90 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 BORCS8Q96FH0 119 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 POM121Q96HA1 1249 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 DMRTA2Q96SC8 542 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 BCL2L14Q9BZR8 327 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 PCDHB16Q9NRJ7 776 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 Q9UFV3 132 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 STARD10Q9Y365 291 aa13.13□□□□□ -0.31
SCLT1-209ENST00000511426 NOP16Q9Y3C1 178 aaKnown RBP13.13□□□□□ -0.31
SCLT1-209ENST00000511426 MPC1Q9Y5U8 109 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms