RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PRF1P14222 555 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 PSMB6P28072 239 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 THBS4P35443 961 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 KISS1Q15726 138 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 SMUG1Q53HV7 270 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 FAM74A1Q5RGS3 127 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 C10orf128Q5T292 105 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 RAET1LQ5VY80 246 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 IFI44Q8TCB0 444 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 SSC4DQ8WTU2 575 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 CHMP1AQ9HD42 196 aaPredicted RBP15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 MBD2Q9UBB5 411 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 GPR132Q9UNW8 380 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 F5H0A9 414 aaPredicted RBP15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 RAD51DO75771 328 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 AMY2BP19961 511 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 SERPINF1P36955 418 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 PTGFRP43088 359 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 NPY4RP50391 375 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 DSCR4P56555 118 aaPredicted RBP15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 BTN1A1Q13410 526 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 PXDC1Q5TGL8 231 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 MOB3CQ70IA8 216 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 MR1Q95460 341 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 TMEM54Q969K7 222 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 ZNF75AQ96N20 296 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 S100A13Q99584 98 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 ARPC5LQ9BPX5 153 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 ANGPTL4Q9BY76 406 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 PTRH2Q9Y3E5 179 aaKnown RBP15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 TMEM265A0A087WTH1 108 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 A0A0U1RQV5 110 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 CRHP06850 196 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 OR3A2P47893 321 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 TMEM185AQ8NFB2 350 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 GNRHR2Q96P88 292 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 NMES1Q9C002 83 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 ZNF700Q9H0M5 742 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 DKKL1Q9UK85 242 aa15.78■□□□□ 0.12
CCHCR1-228ENST00000509552 E9PLN8 166 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 TSPAN4O14817 238 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 DHRS3O75911 302 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 IGLV3-1P01715 115 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 APOC1P02654 83 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 SSR4P51571 173 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 CSNK2A1P68400 391 aaPredicted RBP15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 FAM89BQ8N5H3 189 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 OR5D18Q8NGL1 313 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 NPRL2Q8WTW4 380 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 PP6455Q8WZ26 134 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 LYZL4Q96KX0 146 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 PILRBQ9UKJ0 227 aa15.77■□□□□ 0.12
CCHCR1-228ENST00000509552 IGHV3-15A0A0B4J1V0 119 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 CEACAM18A8MTB9 384 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 C9J4A7 227 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 GDF9O60383 454 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 CCL3P10147 92 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 LIFP15018 202 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 FPR2P25090 351 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 ALDH3B1P43353 468 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 SNTB1Q13884 538 aaKnown RBP15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 ENDOGQ14249 297 aaKnown RBP15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 PAN3Q58A45 887 aaKnown RBP15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 LRRC18Q8N456 261 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 M1APQ8TC57 530 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 MRPS24Q96EL2 167 aaKnown RBP15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 LIN37Q96GY3 246 aaPredicted RBP15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 IMMP1LQ96LU5 166 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 JSRP1Q96MG2 331 aaPredicted RBP15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 ZNF385AQ96PM9 386 aaKnown RBP15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 CDC6Q99741 560 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 ST6GALNAC5Q9BVH7 336 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 RBM24Q9BX46 236 aaKnown RBP15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 C5orf66Q9H5L9 145 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 TAS2R3Q9NYW6 316 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 V9GYS6 101 aa15.77■□□□□ 0.11
CCHCR1-228ENST00000509552 OR5H15A6NDH6 313 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 STMND1H3BQB6 276 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 DHHO43323 396 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 SFT2D2O95562 160 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 UMODP07911 640 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 COX6A1P12074 109 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 CNR1P21554 472 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 ZNF133P52736 654 aaPredicted RBP15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 TAS2R46P59540 309 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 PHYHD1Q5SRE7 291 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 PMS2CLQ68D20 193 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 FOXL2NBQ6ZUU3 175 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 STPG2Q8N412 459 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 OR9K2Q8NGE7 335 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 DCUN1D4Q92564 292 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 CSAG2Q9Y5P2 127 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 PI4KAP42356 2102 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 YKT6O15498 198 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 MTRF1O75570 445 aaKnown RBP15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 PRKACBP22694 351 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 ZNF84P51523 738 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 ARL6IP1Q15041 203 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms