RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 CLDN34H7C241 214 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 ENSAO43768 121 aaKnown RBP6.2□□□□□ -1.42
CCSER1-208ENST00000509109 GMDSO60547 372 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 CYB5R3P00387 301 aaPredicted RBP6.2□□□□□ -1.42
CCSER1-208ENST00000509109 IFNGP01579 166 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 APOC1P02654 83 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 WNT2P09544 360 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 HKR1P10072 659 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 GGT2P36268 569 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 CD200P41217 278 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 SLC15A1P46059 708 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 BPIFB3P59826 476 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 SEC61A1P61619 476 aaKnown RBP6.2□□□□□ -1.42
CCSER1-208ENST00000509109 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.2□□□□□ -1.42
CCSER1-208ENST00000509109 BAMBIQ13145 260 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 PDCD1Q15116 288 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 TAF13Q15543 124 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 OR8G1Q15617 311 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 KRTAP27-1Q3LI81 207 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 CLEC12AQ5QGZ9 265 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 OTPQ5XKR4 325 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 PGBD2Q6P3X8 592 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 Q6ZPA2 131 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 C9orf139Q6ZV77 190 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 LINC00346Q8IVM7 164 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 ARHGAP24Q8N264 748 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 FTMTQ8N4E7 242 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 ZDHHC22Q8N966 263 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 SPERTQ8NA61 448 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 ZNF420Q8TAQ5 688 aaPredicted RBP6.2□□□□□ -1.42
CCSER1-208ENST00000509109 UPRTQ96BW1 309 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 COPS4Q9BT78 406 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 MLST8Q9BVC4 326 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 TRIM15Q9C019 465 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 MMADHCQ9H3L0 296 aaPredicted RBP6.2□□□□□ -1.42
CCSER1-208ENST00000509109 MUC13Q9H3R2 512 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 WDR76Q9H967 626 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 ESM1Q9NQ30 184 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 TBC1D23Q9NUY8 699 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 MRPL15Q9P015 296 aaKnown RBP6.2□□□□□ -1.42
CCSER1-208ENST00000509109 ZNF69Q9UC07 566 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 CD300AQ9UGN4 299 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 TAGLN3Q9UI15 199 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 BAIAP2Q9UQB8 552 aa6.2□□□□□ -1.42
CCSER1-208ENST00000509109 GGT3PA6NGU5 568 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 RIIAD1A6NNX1 92 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 CD300LBA8K4G0 201 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 ZNF878C9JN71 531 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 TNFRSF11BO00300 401 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 XRCC2O43543 280 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 NDUFA2O43678 99 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 GPANK1O95872 356 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 HLA-DPB1P04440 258 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 LIPFP07098 398 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 SPARCP09486 303 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 ZNF3P17036 446 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 CFL1P23528 166 aaKnown RBP6.19□□□□□ -1.42
CCSER1-208ENST00000509109 FMO3P31513 532 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 ENTPD1P49961 510 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 LGALS4P56470 323 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 PAX8Q06710 450 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 GK3PQ14409 553 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 SNCBQ16143 134 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 GPR157Q5UAW9 335 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 DEFB107AQ8IZN7 70 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 OR2T33Q8NG76 320 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 RAB40AQ8WXH6 277 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 SLCO4A1Q96BD0 722 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 TECTBQ96PL2 329 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 CDRT15Q96T59 188 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 TMEM246Q9BRR3 403 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 FN3KQ9H479 309 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 MAGIXQ9H6Y5 334 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 EGLN3Q9H6Z9 239 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 REEP1Q9H902 201 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 SP140LQ9H930 580 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 TMEM165Q9HC07 324 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 PNRC2Q9NPJ4 139 aaKnown RBP6.19□□□□□ -1.42
CCSER1-208ENST00000509109 C14orf119Q9NWQ9 140 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 IL20Q9NYY1 176 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 ACTR3BQ9P1U1 418 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 ERVK-18Q9QC07 812 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 RNF7Q9UBF6 113 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 ARL2BPQ9Y2Y0 163 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 LYVE1Q9Y5Y7 322 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 COMMD3-BMI1R4GMX3 469 aa6.19□□□□□ -1.42
CCSER1-208ENST00000509109 VWFP04275 2813 aa6.18□□□□□ -1.42
CCSER1-208ENST00000509109 TRAV38-1A0A0B4J264 116 aa6.18□□□□□ -1.42
CCSER1-208ENST00000509109 KIR2DS1A0A191URI9 304 aa6.18□□□□□ -1.42
CCSER1-208ENST00000509109 A6NLC8 198 aa6.18□□□□□ -1.42
CCSER1-208ENST00000509109 ANKRD30BLA7E2S9 258 aa6.18□□□□□ -1.42
CCSER1-208ENST00000509109 H0YL77 283 aa6.18□□□□□ -1.42
CCSER1-208ENST00000509109 BHLHE40O14503 412 aa6.18□□□□□ -1.42
CCSER1-208ENST00000509109 CCNB2O95067 398 aa6.18□□□□□ -1.42
CCSER1-208ENST00000509109 PTBP3O95758 552 aaKnown RBP6.18□□□□□ -1.42
CCSER1-208ENST00000509109 HOXB6P17509 224 aaKnown RBP6.18□□□□□ -1.42
CCSER1-208ENST00000509109 PAICSP22234 425 aaKnown RBP6.18□□□□□ -1.42
CCSER1-208ENST00000509109 CA6P23280 308 aa6.18□□□□□ -1.42
CCSER1-208ENST00000509109 HSD11B1P28845 292 aa6.18□□□□□ -1.42
CCSER1-208ENST00000509109 OTX1P32242 354 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms