RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 XRCC2O43543 280 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 DENRO43583 198 aaKnown RBP13.46□□□□□ -0.25
LMNA-222ENST00000508500 IFNGP01579 166 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 GRPP07492 148 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 ANXA8P13928 327 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 ZNF3P17036 446 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 FGF12P61328 243 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 BAMBIQ13145 260 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 SLC9A3R2Q15599 337 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 NLRC3Q7RTR2 1065 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 TEX47Q8TBZ9 253 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 INTS14Q96SY0 518 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 SLC29A1Q99808 456 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 ENOPH1Q9UHY7 261 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 ORC6Q9Y5N6 252 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 hCG_38984A0A1B0GV85 526 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 H3BN98 237 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 ALPLP05186 524 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 ANXA2P07355 339 aaKnown RBP13.45□□□□□ -0.26
LMNA-222ENST00000508500 RNASE1P07998 156 aaKnown RBP13.45□□□□□ -0.26
LMNA-222ENST00000508500 MMP9P14780 707 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 PRKACGP22612 351 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 GSTT1P30711 240 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 OPRL1P41146 370 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 BLVRAP53004 296 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 AQP4P55087 323 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 ZNF121P58317 390 aaPredicted RBP13.45□□□□□ -0.26
LMNA-222ENST00000508500 GRB2P62993 217 aaKnown RBP13.45□□□□□ -0.26
LMNA-222ENST00000508500 POU4F2Q12837 409 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 GINS1Q14691 196 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 RBMS3Q6XE24 437 aaKnown RBP13.45□□□□□ -0.26
LMNA-222ENST00000508500 BRD3OSQ6XYD6 125 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 FAM57BQ71RH2 274 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 FAM90A1Q86YD7 464 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 FGFRL1Q8N441 504 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 GALNT4Q8N4A0 578 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 ZMYND19Q96E35 227 aaPredicted RBP13.45□□□□□ -0.26
LMNA-222ENST00000508500 REEP6Q96HR9 211 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 OR51V1Q9H2C8 321 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 TOR3AQ9H497 397 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 SMPD3Q9NY59 655 aaPredicted RBP13.45□□□□□ -0.26
LMNA-222ENST00000508500 DNAJC27Q9NZQ0 273 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 PDP1Q9P0J1 537 aaPredicted RBP13.45□□□□□ -0.26
LMNA-222ENST00000508500 KLHDC2Q9Y2U9 406 aa13.45□□□□□ -0.26
LMNA-222ENST00000508500 NOP16Q9Y3C1 178 aaKnown RBP13.45□□□□□ -0.26
LMNA-222ENST00000508500 IGHV3OR15-7A0A075B7D8 119 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 A0A1B0GW55 424 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 OOEPA6NGQ2 149 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 H0YAE9 185 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 EI24O14681 340 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 KCNAB3O43448 404 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 ADAM20O43506 726 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 SELENOFO60613 162 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 GYPAP02724 150 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 SFTPBP07988 381 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 DUX4L2P0CJ85 424 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 DUX4L3P0CJ86 424 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 DUX4L4P0CJ87 422 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 DUX4L5P0CJ88 424 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 DUX4L6P0CJ89 424 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 DUX4L7P0CJ90 424 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 DDOSTP39656 456 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 SLC15A1P46059 708 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 CDK5Q00535 292 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 OR8B8Q15620 311 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 TEX36Q5VZQ5 186 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 PLBD1Q6P4A8 553 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 DUX4L9Q6RFH8 374 aaPredicted RBP13.44□□□□□ -0.26
LMNA-222ENST00000508500 SPERTQ8NA61 448 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 SGMS2Q8NHU3 365 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 OTULINQ96BN8 352 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 SEH1LQ96EE3 360 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 TBX15Q96SF7 602 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 PRDM13Q9H4Q3 707 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 OPA3Q9H6K4 179 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 DUX4Q9UBX2 424 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 PCDHGB1Q9Y5G3 927 aa13.44□□□□□ -0.26
LMNA-222ENST00000508500 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.43□□□□□ -0.26
LMNA-222ENST00000508500 CLDN34H7C241 214 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 AMY2BP19961 511 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 POU1F1P28069 291 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 HSD11B1P28845 292 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 CFHR2P36980 270 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 GSK3AP49840 483 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 NPY4RP50391 375 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 CSNK2BP67870 215 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 FOXL1Q12952 345 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 MED21Q13503 144 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 TIGD6Q17RP2 521 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 DEFB112Q30KQ8 113 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 TMEM236Q5W0B7 351 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 RUSC1-AS1Q66K80 236 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 KDM4DQ6B0I6 523 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 FAHD1Q6P587 224 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 RHOUQ7L0Q8 258 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 SHFQ7M4L6 423 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 DHRSXQ8N5I4 330 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 BBS1Q8NFJ9 593 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 OR1M1Q8NGA1 313 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 OTOSQ8NHW6 89 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms