RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 EXO1Q9UQ84 846 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CLDN24A6NM45 220 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 OR7A17O14581 309 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 SC5DO75845 299 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ONECUT2O95948 504 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 STAG3L3P0CL85 134 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 EMDP50402 254 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 PNLIPRP2P54317 469 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 NCS1P62166 190 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF616Q08AN1 781 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 C6orf136Q5SQH8 315 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF425Q6IV72 752 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 CLDN22Q8N7P3 220 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 OR7G2Q8NG99 324 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 MIB2Q96AX9 1013 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 LAT2Q9GZY6 243 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 SH2D2AQ9NP31 389 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 PLCXD1Q9NUJ7 323 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 SLC2A8Q9NY64 477 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 NTMQ9P121 344 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ZDHHC2Q9UIJ5 367 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 AMMECR1Q9Y4X0 333 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 A6NNC1 897 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 DLGAP1O14490 977 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 BHLHE40O14503 412 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 TRAF3IP2O43734 574 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ANGPTL7O43827 346 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 EIF4E2O60573 245 aaKnown RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 EEDO75530 441 aaKnown RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 SULT1C4O75897 302 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 NCR1O76036 304 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 CDRT1O95170 752 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 TXNDC12O95881 172 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 HTN1P15515 57 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 GPR6P46095 362 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 NDUFA6P56556 154 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 CYCSP99999 105 aaKnown RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 OR1Q1Q15612 314 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ZIC1Q15915 447 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 NSUN5P1Q3KNT7 163 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 LINC00303Q3SY05 128 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 THEM4Q5T1C6 240 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 LETMD1Q6P1Q0 360 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 C20orf204Q6ZNR8 217 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 SLCO4C1Q6ZQN7 724 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF573Q86YE8 665 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 PDZD9Q8IXQ8 264 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 DTWD1Q8N5C7 304 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 SAMD12Q8N8I0 201 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ASB17Q8WXJ9 295 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ADIPOR1Q96A54 375 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 LGALS12Q96DT0 336 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 RBMXL1Q96E39 390 aaKnown RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 MALSU1Q96EH3 234 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 MARS2Q96GW9 593 aaKnown RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 C10orf90Q96M02 699 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 OXGR1Q96P68 337 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ATP5SQ99766 215 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM72A0PK05 275 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 LRP5LA4QPB2 252 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 CHEK1O14757 476 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 F13BP05160 661 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 GLAP06280 429 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF17P17021 662 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 CD22P20273 847 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 GPX3P22352 226 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ERP29P30040 261 aaKnown RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 PRSS3P35030 304 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 PPT1P50897 306 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 SLC35A2P78381 396 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 GK3PQ14409 553 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 HAGHQ16775 308 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 SMIM21Q3B7S5 101 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ARHGAP11BQ3KRB8 267 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ACSF3Q4G176 576 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 DEFB121Q5J5C9 76 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ENTPD8Q5MY95 495 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 MRPL2Q5T653 305 aaKnown RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 CST9LP1Q5W188 147 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 LPCAT3Q6P1A2 487 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 HS3ST5Q8IZT8 346 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 OR6V1Q8N148 313 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 KDM8Q8N371 416 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 LINC01555Q8NAE3 123 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 SLC30A7Q8NEW0 376 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 SECTM1Q8WVN6 248 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 GLMPQ8WWB7 406 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 FRZBQ92765 325 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 PINX1Q96BK5 328 aaKnown RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ZMYND19Q96E35 227 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 PDLIM5Q96HC4 596 aaKnown RBP2.63□□□□□ -1.99
NEDD4-208ENST00000508342 PDCD1LG2Q9BQ51 273 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 DCTN5Q9BTE1 182 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 CXorf21Q9HAI6 301 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 ASCL3Q9NQ33 180 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 HRH3Q9Y5N1 445 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 PTGDR2Q9Y5Y4 395 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 NPTNQ9Y639 398 aa2.63□□□□□ -1.99
NEDD4-208ENST00000508342 NOTCH4Q99466 2003 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms