RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DUX4L2P0CJ85 424 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 DUX4L3P0CJ86 424 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 DUX4L4P0CJ87 422 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 DUX4L5P0CJ88 424 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 DUX4L6P0CJ89 424 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 DUX4L7P0CJ90 424 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 OMGP23515 440 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 ELF3P78545 371 aaPredicted RBP10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 POU4F2Q12837 409 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 GFOD2Q3B7J2 385 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 METTL11BQ5VVY1 283 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 DUX4L9Q6RFH8 374 aaPredicted RBP10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 BTN2A1Q7KYR7 527 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 RHOUQ7L0Q8 258 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 TMEM179BQ7Z7N9 219 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 OTOSQ8NHW6 89 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 GATAD2BQ8WXI9 593 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 ZDHHC16Q969W1 377 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 TMIGD2Q96BF3 282 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 OTULINQ96BN8 352 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 ITPKCQ96DU7 683 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 CHID1Q9BWS9 393 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 PAPOLGQ9BWT3 736 aaKnown RBP10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 NOX4Q9NPH5 578 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 KIF17Q9P2E2 1029 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 DUX4Q9UBX2 424 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 RHBDD3Q9Y3P4 386 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 MMP24Q9Y5R2 645 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 NOTCH1P46531 2555 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 SELENOFO60613 162 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 TIPRLO75663 272 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 ECDO95905 644 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 CST1P01037 141 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 LYNP07948 512 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 MELTFP08582 738 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 MUC1P15941 1255 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 CFL1P23528 166 aaKnown RBP10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 ACKR3P25106 362 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 MICBQ29980 383 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 C11orf91Q3C1V1 193 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 WDR38Q5JTN6 314 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 PLBD1Q6P4A8 553 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 SHFQ7M4L6 423 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 TMEM86BQ8N661 226 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 CCDC197Q8NCU1 140 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 CSNK2A3Q8NEV1 391 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 WFDC12Q8WWY7 111 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 ST8SIA4Q92187 359 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 SEH1LQ96EE3 360 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 LRGUKQ96M69 825 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 CHIAQ9BZP6 476 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 SLITRK2Q9H156 845 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 OR10A2Q9H208 303 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 C1orf21Q9H246 121 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 OR51V1Q9H2C8 321 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 RGCCQ9H4X1 137 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 SP140LQ9H930 580 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 BRD7Q9NPI1 651 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 ACOXLQ9NUZ1 547 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 TAS2R1Q9NYW7 299 aa10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 RPUSD1Q9UJJ7 312 aaKnown RBP10.74□□□□□ -0.69
HMGCS1-205ENST00000508319 IGHV1-69DA0A0B4J2H0 117 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 IGHV1-69P01742 117 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 H2BFMP0C1H6 154 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 PAICSP22234 425 aaKnown RBP10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 RAG2P55895 527 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 PSMA6P60900 246 aaKnown RBP10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 ARF6P62330 175 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 RELBQ01201 579 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 GINS1Q14691 196 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 PDCD1Q15116 288 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 FIP1L1Q6UN15 594 aaKnown RBP10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 HS3ST5Q8IZT8 346 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 GALNT4Q8N4A0 578 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 FAM216BQ8N7L0 139 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 ZNF454Q8N9F8 522 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 CANT1Q8WVQ1 401 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 LHX4Q969G2 390 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 C12orf43Q96C57 262 aaKnown RBP10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 PGAM5Q96HS1 289 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 FAM71F1Q96KD3 344 aaPredicted RBP10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 LYZL4Q96KX0 146 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 CCL13Q99616 98 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 FGF23Q9GZV9 251 aaPredicted RBP10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 TNFRSF19Q9NS68 423 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 PDP1Q9P0J1 537 aaPredicted RBP10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 KLHDC2Q9Y2U9 406 aa10.73□□□□□ -0.69
HMGCS1-205ENST00000508319 AQP12BA6NM10 295 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 PRR23D1E9PI22 279 aaPredicted RBP10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 CDIPTO14735 213 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 PRODHO43272 600 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 KCNAB3O43448 404 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 PRR23D2P0DMB1 279 aaPredicted RBP10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 SELLP14151 372 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 AMY2BP19961 511 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 SLC2A5P22732 501 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 POU1F1P28069 291 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 GNALP38405 381 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 NAA10P41227 235 aaPredicted RBP10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 CDK5Q00535 292 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms