RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 OR1M1Q8NGA1 313 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 OR10Z1Q8NGY1 313 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 NRBF2Q96F24 287 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 C1orf147Q96MC9 270 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 WDFY2Q96P53 400 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 THTPAQ9BU02 230 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 RTL8AQ9BWD3 113 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 PAPOLGQ9BWT3 736 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 PRRG3Q9BZD7 231 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 OR51V1Q9H2C8 321 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 PDP1Q9P0J1 537 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 CTSZQ9UBR2 303 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 CAB39Q9Y376 341 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 MMP24Q9Y5R2 645 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 KPTNQ9Y664 436 aa11.98□□□□□ -0.49
HMGCS1-203ENST00000507004 FAM183AA6NL82 134 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 TMPRSS2O15393 492 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 CST4P01036 141 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 T-ENOLP0DO92 83 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 PSKH1P11801 424 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 ATP6V1B1P15313 513 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 EGR1P18146 543 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 POU1F1P28069 291 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 RBMXP38159 391 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 GSK3AP49840 483 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 GINS1Q14691 196 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 PRR31Q5SQ13 230 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 KCTD18Q6PI47 426 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 SPATC1Q76KD6 591 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 CMTM4Q8IZR5 234 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 TBC1D15Q8TC07 691 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 LRRC29Q8WV35 223 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 CANT1Q8WVQ1 401 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 HIST1H2AAQ96QV6 131 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 PCGF1Q9BSM1 259 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 TLNRD1Q9H1K6 362 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 PCDHGB1Q9Y5G3 927 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 TMEM14AQ9Y6G1 99 aa11.97□□□□□ -0.49
HMGCS1-203ENST00000507004 A0A1B0GVI7 797 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 DVL1O14640 695 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 GYPAP02724 150 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 MMP9P14780 707 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 DCTDP32321 178 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 PSMA6P60900 246 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 CDK5Q00535 292 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 FLOT2Q14254 428 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 ATPAF1Q5TC12 328 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 LCN1P1Q5VSP4 162 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 PLBD1Q6P4A8 553 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 Q6YL49 198 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 FAM90A1Q86YD7 464 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 C19orf18Q8NEA5 215 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 OR4F5Q8NH21 305 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 NPRL2Q8WTW4 380 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 THEM6Q8WUY1 208 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 SSMEM1Q8WWF3 244 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 DUX5Q96PT3 197 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 CNTD2Q9H8S5 307 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 UNKLQ9H9P5 680 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 SLC25A19Q9HC21 320 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 ACOXLQ9NUZ1 547 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 DNAJB9Q9UBS3 223 aa11.96□□□□□ -0.49
HMGCS1-203ENST00000507004 IGHV3OR16-10A0A075B7F0 116 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 NKX6-3A6NJ46 265 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 GYG2O15488 501 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 HOXA3O43365 443 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 NDUFB3O43676 98 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 ZNF254O75437 659 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 RPS7P62081 194 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 GUCA2AQ02747 115 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 DEFB112Q30KQ8 113 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 CDONQ4KMG0 1287 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 KLHL12Q53G59 568 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 LRRC10Q5BKY1 277 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 METAP1DQ6UB28 335 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 WDR82Q6UXN9 313 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 ZNF826PQ6ZT77 177 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 BTN2A1Q7KYR7 527 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 KRT74Q7RTS7 529 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 TRPM8Q7Z2W7 1104 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 KRT77Q7Z794 578 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 SPATA24Q86W54 205 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 IQCF1Q8N6M8 205 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 KIR3DL3Q8N743 410 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 TMIGD2Q96BF3 282 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 ITPKCQ96DU7 683 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 MED30Q96HR3 178 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 MROQ9BYG7 248 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 SIRPDQ9H106 197 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 MED20Q9H944 212 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 BEX1Q9HBH7 125 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 DNAJC27Q9NZQ0 273 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 RPUSD1Q9UJJ7 312 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 LAMP5Q9UJQ1 280 aa11.95□□□□□ -0.5
HMGCS1-203ENST00000507004 IGHV1-69DA0A0B4J2H0 117 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 A0A0U1RQV5 110 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 CENPVL3A0A0U1RRI6 287 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 C5orf63A6NC05 138 aa11.94□□□□□ -0.5
HMGCS1-203ENST00000507004 IGHV1-69P01742 117 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms