RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SIRPDQ9H106 197 aa10.86□□□□□ -0.67
DDX41-204ENST00000504807 C1orf21Q9H246 121 aa10.86□□□□□ -0.67
DDX41-204ENST00000504807 MMP27Q9H306 513 aa10.86□□□□□ -0.67
DDX41-204ENST00000504807 CCDC182A6NF36 153 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 PIN1P1O15428 100 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 HOXA3O43365 443 aaPredicted RBP10.85□□□□□ -0.67
DDX41-204ENST00000504807 XRCC2O43543 280 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 IFNGP01579 166 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 IRF2P14316 349 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 OMGP23515 440 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 NAA10P41227 235 aaPredicted RBP10.85□□□□□ -0.67
DDX41-204ENST00000504807 GSK3AP49840 483 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 GRB2P62993 217 aaKnown RBP10.85□□□□□ -0.67
DDX41-204ENST00000504807 RELBQ01201 579 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 WDR82Q6UXN9 313 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 NLRC3Q7RTR2 1065 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 BCDIN3DQ7Z5W3 292 aaKnown RBP10.85□□□□□ -0.67
DDX41-204ENST00000504807 CPOQ8IVL8 374 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 FAM216BQ8N7L0 139 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 OR1M1Q8NGA1 313 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 OTOSQ8NHW6 89 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 LRRC29Q8WV35 223 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 HPSE2Q8WWQ2 592 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 PPP1R14AQ96A00 147 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 ITPKCQ96DU7 683 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 PLEKHA8Q96JA3 519 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 CCL13Q99616 98 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 PCGF1Q9BSM1 259 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 WDR13Q9H1Z4 485 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 PRDM13Q9H4Q3 707 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 TNFRSF19Q9NS68 423 aa10.85□□□□□ -0.67
DDX41-204ENST00000504807 CENPVL3A0A0U1RRI6 287 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 TCRBV3S1A0A5B6 114 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 A6NLC8 198 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 AQP12BA6NM10 295 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 ZNF879B4DU55 563 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 PSMD9O00233 223 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 DVL1O14640 695 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 FKBP6O75344 327 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 MDKP21741 143 aaPredicted RBP10.84□□□□□ -0.67
DDX41-204ENST00000504807 CPT2P23786 658 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 WDR38Q5JTN6 314 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 AQP12AQ8IXF9 295 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 PLPP7Q8NBV4 271 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 OR5T2Q8NGG2 359 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 OR8B12Q8NGG6 310 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 LRGUKQ96M69 825 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 KRTAP17-1Q9BYP8 105 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 TTTY10Q9BZA0 68 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 SLC22A4Q9H015 551 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 TLNRD1Q9H1K6 362 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 COPS3Q9UNS2 423 aa10.84□□□□□ -0.67
DDX41-204ENST00000504807 hCG_1807616A0A1W2PRN6 198 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 PRR23D1E9PI22 279 aaPredicted RBP10.83□□□□□ -0.68
DDX41-204ENST00000504807 CLDN34H7C241 214 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 CDIPTO14735 213 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 ENSAO43768 121 aaKnown RBP10.83□□□□□ -0.68
DDX41-204ENST00000504807 MITFO75030 526 aaPredicted RBP10.83□□□□□ -0.68
DDX41-204ENST00000504807 MRPL3P09001 348 aaKnown RBP10.83□□□□□ -0.68
DDX41-204ENST00000504807 H2BFMP0C1H6 154 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 PRR23D2P0DMB1 279 aaPredicted RBP10.83□□□□□ -0.68
DDX41-204ENST00000504807 OSMP13725 252 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 HSD11B1P28845 292 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 EPHA2P29317 976 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 GMFBP60983 142 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 TIGD6Q17RP2 521 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 RBMS3Q6XE24 437 aaKnown RBP10.83□□□□□ -0.68
DDX41-204ENST00000504807 Q6ZPA2 131 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 BTN2A1Q7KYR7 527 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 PDZD9Q8IXQ8 264 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 PIP4P2Q8N4L2 257 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 PAPD5Q8NDF8 572 aaKnown RBP10.83□□□□□ -0.68
DDX41-204ENST00000504807 THEM6Q8WUY1 208 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 RPL3LQ92901 407 aaKnown RBP10.83□□□□□ -0.68
DDX41-204ENST00000504807 WDFY2Q96P53 400 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 SEMA6AQ9H2E6 1030 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 SNTG1Q9NSN8 517 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 POMPQ9Y244 141 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 LRP12Q9Y561 859 aa10.83□□□□□ -0.68
DDX41-204ENST00000504807 TRAV38-1A0A0B4J264 116 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 ANKRD30BLA7E2S9 258 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 ZNF850A8MQ14 1090 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 MAGEB4O15481 346 aaPredicted RBP10.82□□□□□ -0.68
DDX41-204ENST00000504807 PRB2P02812 416 aaPredicted RBP10.82□□□□□ -0.68
DDX41-204ENST00000504807 LYNP07948 512 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 MELTFP08582 738 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 ALOX5APP20292 161 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 DCTDP32321 178 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 SLC15A1P46059 708 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 DAPP51397 102 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 KRTAP10-3P60369 221 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 ARF6P62330 175 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 CBX1P83916 185 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 MFGE8Q08431 387 aaPredicted RBP10.82□□□□□ -0.68
DDX41-204ENST00000504807 PRDX4Q13162 271 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 STUMQ69YW2 141 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 TRPM8Q7Z2W7 1104 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 SPATA24Q86W54 205 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 OR8S1Q8NH09 359 aa10.82□□□□□ -0.68
DDX41-204ENST00000504807 OR5P3Q8WZ94 311 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms