RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 MALSU1Q96EH3 234 aa3.97□□□□□ -1.77
MATR3-202ENST00000502422 ZNF764Q96H86 408 aaPredicted RBP3.97□□□□□ -1.77
MATR3-202ENST00000502422 CCL19Q99731 98 aa3.97□□□□□ -1.77
MATR3-202ENST00000502422 CITED2Q99967 270 aaPredicted RBP3.97□□□□□ -1.77
MATR3-202ENST00000502422 PINK1Q9BXM7 581 aa3.97□□□□□ -1.77
MATR3-202ENST00000502422 RIMS4Q9H426 269 aaPredicted RBP3.97□□□□□ -1.77
MATR3-202ENST00000502422 TMEM38AQ9H6F2 299 aa3.97□□□□□ -1.77
MATR3-202ENST00000502422 GPN1Q9HCN4 374 aaPredicted RBP3.97□□□□□ -1.77
MATR3-202ENST00000502422 MEPEQ9NQ76 525 aaPredicted RBP3.97□□□□□ -1.77
MATR3-202ENST00000502422 PNO1Q9NRX1 252 aaKnown RBP3.97□□□□□ -1.77
MATR3-202ENST00000502422 LANCL2Q9NS86 450 aa3.97□□□□□ -1.77
MATR3-202ENST00000502422 KLK11Q9UBX7 282 aa3.97□□□□□ -1.77
MATR3-202ENST00000502422 ZNF230Q9UIE0 474 aaPredicted RBP3.97□□□□□ -1.77
MATR3-202ENST00000502422 TNFSF18Q9UNG2 199 aa3.97□□□□□ -1.77
MATR3-202ENST00000502422 FAM96BQ9Y3D0 163 aa3.97□□□□□ -1.77
MATR3-202ENST00000502422 TLN2Q9Y4G6 2542 aa3.97□□□□□ -1.77
MATR3-202ENST00000502422 A0A0D9SG52 128 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 hCG_1809904A0A1W2PP81 198 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 A0A1W2PR64 198 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 A0A1W2PRV1 198 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 TMEM72A0PK05 275 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 AHRRA9YTQ3 701 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 ZNF879B4DU55 563 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SCAMP2O15127 329 aaKnown RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 NDUFS4O43181 175 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 CHST10O43529 356 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SLC25A17O43808 307 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 KHDRBS3O75525 346 aaKnown RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 MED6O75586 246 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SNRPCP09234 159 aaKnown RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 ERGP11308 486 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 ZNF14P17017 642 aaPredicted RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 RAB5AP20339 215 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 MAOAP21397 527 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 PPIBP23284 216 aaKnown RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 CTSSP25774 331 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 AKR1C3P42330 323 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 CDX1P47902 265 aaPredicted RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 DNASE1L1P49184 302 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 PTH2RP49190 550 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 RAE1P78406 368 aaKnown RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 CDK6Q00534 326 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 TNFRSF9Q07011 255 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 ZNF345Q14585 488 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SURF2Q15527 256 aaPredicted RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 GGTA1PQ4G0N0 100 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 AARDQ4LEZ3 155 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 DEFB134Q4QY38 66 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 ZNF385BQ569K4 471 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SLC35D3Q5M8T2 416 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 NKAPLQ5M9Q1 402 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 DCST1Q5T197 706 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 VN1R4Q7Z5H5 301 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 ZNF546Q86UE3 836 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 CMTM4Q8IZR5 234 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 PAQR4Q8N4S7 273 aaPredicted RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 APCDD1LQ8NCL9 501 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SDR9C7Q8NEX9 313 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 OR51S1Q8NGJ8 323 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 OR5J2Q8NH18 312 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 BBS10Q8TAM1 723 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 ZNF480Q8WV37 535 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SMPDL3BQ92485 455 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 RAB3CQ96E17 227 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 METTL9Q9H1A3 318 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 RHBGQ9H310 441 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 TMEM185BQ9H7F4 350 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SEC61A2Q9H9S3 476 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 TMEM27Q9HBJ8 222 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 MAN2C1Q9NTJ4 1040 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 GFOD1Q9NXC2 390 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 WWOXQ9NZC7 414 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 NPFFR2Q9Y5X5 522 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 MBD3L4A6NDZ8 208 aaPredicted RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 MBD3L5A6NJ08 208 aaPredicted RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 GABARAPH6UMI1 98 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SULT2B1O00204 365 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SH3BGRLO75368 114 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 STK16O75716 305 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 EPPINO95925 133 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 CD8AP01732 235 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 MBP02144 154 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 CD74P04233 296 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 ATP1B1P05026 303 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 H1F0P07305 194 aaKnown RBP3.96□□□□□ -1.78
MATR3-202ENST00000502422 SFTPBP07988 381 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 FAM157CP0CG43 387 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 C1GALT1C1LP0DN25 315 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SLC2A1P11166 492 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SLC25A4P12235 298 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 CPT2P23786 658 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 CRABP1P29762 137 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 DCTDP32321 178 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 MPIP34949 423 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 OPRM1P35372 400 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 TIMP3P35625 211 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 SERPINF1P36955 418 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 RAB5CP51148 216 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 GMFBP60983 142 aa3.96□□□□□ -1.78
MATR3-202ENST00000502422 PKIAP61925 76 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms