RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 DACT3Q96B18 629 aaPredicted RBP13.41□□□□□ -0.26
NR1H3-227ENST00000498548 SEH1LQ96EE3 360 aa13.41□□□□□ -0.26
NR1H3-227ENST00000498548 ZNF48Q96MX3 618 aaPredicted RBP13.41□□□□□ -0.26
NR1H3-227ENST00000498548 PAPOLGQ9BWT3 736 aaKnown RBP13.41□□□□□ -0.26
NR1H3-227ENST00000498548 KRT84Q9NSB2 600 aa13.41□□□□□ -0.26
NR1H3-227ENST00000498548 AP4S1Q9Y587 144 aa13.41□□□□□ -0.26
NR1H3-227ENST00000498548 KIR2DS1A0A191URI9 304 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 OOEPA6NGQ2 149 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 ZNF850A8MQ14 1090 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 C22orf46C9J442 243 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 HAX1O00165 279 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 ATP5HO75947 161 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 LHBP01229 141 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 CPT2P23786 658 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 FASP25445 335 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 GNALP38405 381 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 GMFBP60983 142 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 MZT1Q08AG7 82 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 C12orf54Q6X4T0 127 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 PARP8Q8N3A8 854 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 FGFRL1Q8N441 504 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 DNAJC9Q8WXX5 260 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 PIGCQ92535 297 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 JMJD8Q96S16 334 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 YIPF3Q9GZM5 350 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 SEMA6AQ9H2E6 1030 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 ERVK-18Q9QC07 812 aa13.4□□□□□ -0.26
NR1H3-227ENST00000498548 TRAV38-1A0A0B4J264 116 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 A0A1B0GW55 424 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 MAGEB4O15481 346 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-227ENST00000498548 FCN3O75636 299 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 DUX4L2P0CJ85 424 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 DUX4L3P0CJ86 424 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 DUX4L4P0CJ87 422 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 DUX4L5P0CJ88 424 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 DUX4L6P0CJ89 424 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 DUX4L7P0CJ90 424 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 CFL1P23528 166 aaKnown RBP13.39□□□□□ -0.27
NR1H3-227ENST00000498548 PSMA6P60900 246 aaKnown RBP13.39□□□□□ -0.27
NR1H3-227ENST00000498548 FGF12P61328 243 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 ESRRGP62508 458 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 PRDX4Q13162 271 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 DMRTC1Q5HYR2 192 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 DUX4L9Q6RFH8 374 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-227ENST00000498548 FAM90A1Q86YD7 464 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 CSNK2A3Q8NEV1 391 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 FAM216AQ8WUB2 273 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 ZFAND2BQ8WV99 257 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 RPL3LQ92901 407 aaKnown RBP13.39□□□□□ -0.27
NR1H3-227ENST00000498548 IL4I1Q96RQ9 567 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 MICU1Q9BPX6 476 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 FGF23Q9GZV9 251 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-227ENST00000498548 MS4A7Q9GZW8 240 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-227ENST00000498548 SMURF1Q9HCE7 757 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 DUX4Q9UBX2 424 aa13.39□□□□□ -0.27
NR1H3-227ENST00000498548 TRAV40A0A0B4J280 105 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 ZAR1LA6NP61 321 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 CDIPTO14735 213 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 PHYHO14832 338 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 POLR2IP36954 125 aaKnown RBP13.38□□□□□ -0.27
NR1H3-227ENST00000498548 UBA52P62987 128 aaKnown RBP13.38□□□□□ -0.27
NR1H3-227ENST00000498548 KCNJ8Q15842 424 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 LCN1P1Q5VSP4 162 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 SLX4IPQ5VYV7 408 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 C12orf73Q69YU5 71 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 KDM4DQ6B0I6 523 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 WDR82Q6UXN9 313 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 KCTD8Q6ZWB6 473 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 MEPCEQ7L2J0 689 aaKnown RBP13.38□□□□□ -0.27
NR1H3-227ENST00000498548 ZDHHC13Q8IUH4 622 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 GCDHQ92947 438 aaPredicted RBP13.38□□□□□ -0.27
NR1H3-227ENST00000498548 UPRTQ96BW1 309 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 ITPKCQ96DU7 683 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 CCL13Q99616 98 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 RGCCQ9H4X1 137 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 FAM206AQ9NX38 181 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 H2AFY2Q9P0M6 372 aaPredicted RBP13.38□□□□□ -0.27
NR1H3-227ENST00000498548 IKZF2Q9UKS7 526 aa13.38□□□□□ -0.27
NR1H3-227ENST00000498548 ANK2Q01484 3957 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 MDFIC2A0A1B0GVS7 189 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 TMEM269A0A1B0GVZ9 245 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 TFF1P04155 84 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 EFNB1P98172 346 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 BAMBIQ13145 260 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 AADACL4Q5VUY2 407 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 TEX36Q5VZQ5 186 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 KCTD18Q6PI47 426 aaPredicted RBP13.37□□□□□ -0.27
NR1H3-227ENST00000498548 RBMS3Q6XE24 437 aaKnown RBP13.37□□□□□ -0.27
NR1H3-227ENST00000498548 BRD3OSQ6XYD6 125 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 DOK3Q7L591 496 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 GALNT4Q8N4A0 578 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 OR5T2Q8NGG2 359 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 DUS3LQ96G46 650 aaKnown RBP13.37□□□□□ -0.27
NR1H3-227ENST00000498548 RNF170Q96K19 258 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 OR8B4Q96RC9 309 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 CIB1Q99828 191 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 PKP2Q99959 881 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 APOL4Q9BPW4 351 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 PCGF1Q9BSM1 259 aa13.37□□□□□ -0.27
NR1H3-227ENST00000498548 PBOV1Q9GZY1 135 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms