RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CST9Q5W186 159 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 REG3GQ6UW15 175 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 NPSR1Q6W5P4 371 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 ITPRIPQ8IWB1 547 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 Q8N1X5 172 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 Q8N402 240 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 PNKDQ8N490 385 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 OR51E1Q8TCB6 317 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 S100PBPQ96BU1 408 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 PPP1R36Q96LQ0 422 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 HBEGFQ99075 208 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 HIST1H4GQ99525 98 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 GABRG3Q99928 467 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 SELENOSQ9BQE4 189 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 TMEM204Q9BSN7 226 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 CCDC28BQ9BUN5 200 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 OSBPL11Q9BXB4 747 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 C6orf106Q9H6K1 298 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-224ENST00000497488 TRIM45Q9H8W5 580 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-224ENST00000497488 HRASLSQ9HDD0 168 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 KCNJ16Q9NPI9 418 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 TMEM9BQ9NQ34 198 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 ABCB10Q9NRK6 738 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 CLEC4EQ9ULY5 219 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 CFL2Q9Y281 166 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 PYGO1Q9Y3Y4 419 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 SAMHD1Q9Y3Z3 626 aaKnown RBP4.79□□□□□ -1.64
BRCA1-224ENST00000497488 IGLV4-3A0A075B6K6 122 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 DHRS7CA6NNS2 312 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF487B1APH4 448 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 C12orf77C9JDV5 145 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 FTCDNL1E5RQL4 147 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF593O00488 134 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-224ENST00000497488 CDX4O14627 284 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-224ENST00000497488 CIAO1O76071 339 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 RAB36O95755 333 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 PTTG1O95997 202 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 CD8AP01732 235 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 TCP1P17987 556 aaKnown RBP4.78□□□□□ -1.64
BRCA1-224ENST00000497488 AK4P27144 223 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-224ENST00000497488 SERPINB5P36952 375 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 APOC4P55056 127 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 AQP5P55064 265 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 AP1S2P56377 157 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 MXD1Q05195 221 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 MGAT3Q09327 533 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 ELAVL2Q12926 359 aaKnown RBP4.78□□□□□ -1.64
BRCA1-224ENST00000497488 NRF1Q16656 503 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 TTMPQ5BVD1 217 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 EPGNQ6UW88 154 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 DNM1P46Q6ZS02 220 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 DAW1Q8N136 415 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 OR10G3Q8NGC4 313 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 SGTBQ96EQ0 304 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 MED30Q96HR3 178 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 RASL11BQ9BPW5 248 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 PDCD1LG2Q9BQ51 273 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 RIOK2Q9BVS4 552 aaKnown RBP4.78□□□□□ -1.64
BRCA1-224ENST00000497488 DSN1Q9H410 356 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 RDH14Q9HBH5 336 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 PLCXD1Q9NUJ7 323 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 BABAM2Q9NXR7 383 aa4.78□□□□□ -1.64
BRCA1-224ENST00000497488 ARAP2Q8WZ64 1704 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 IGKV1D-13A0A0B4J2D9 117 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 IGHV3-16A0A0C4DH30 117 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 KIR2DS1A0A191URI9 304 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 RPL37AP8A6NKH3 93 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 TMEM114B3SHH9 223 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 C9J4A7 227 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 H0Y980 276 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 HPGDSO60760 199 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 SRP72O76094 671 aaKnown RBP4.77□□□□□ -1.65
BRCA1-224ENST00000497488 LYPLA2O95372 231 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 SNAP29O95721 258 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 AIFM1O95831 613 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 HLA-AP01891 365 aaKnown RBP4.77□□□□□ -1.65
BRCA1-224ENST00000497488 HLA-DRAP01903 254 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 OR5AL1P0C617 328 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 LIMS3P0CW19 117 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 LIMS4P0CW20 117 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 IGKV1-13P0DP09 117 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 HIST1H1CP16403 213 aaKnown RBP4.77□□□□□ -1.65
BRCA1-224ENST00000497488 GNB3P16520 340 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 ZP3P21754 424 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 LMO2P25791 158 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 HSD11B1P28845 292 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 GLP1RP43220 463 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 RND2P52198 227 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 TAS2R31P59538 309 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 TIMM10P62072 90 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 SARNPP82979 210 aaKnown RBP4.77□□□□□ -1.65
BRCA1-224ENST00000497488 TSPAN31Q12999 210 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 KIR2DS1Q14954 304 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 GCSAMLQ5JQS6 135 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 C11orf87Q6NUJ2 197 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 WDR74Q6RFH5 385 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-224ENST00000497488 C9orf47Q6ZRZ4 202 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 HS3ST5Q8IZT8 346 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 SLC22A18ASQ8N1D0 253 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms