RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PECRQ9BY49 303 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC25A51Q9H1U9 297 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 AMBNQ9NP70 447 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 ANKRD10Q9NXR5 420 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 OPTCQ9UBM4 332 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PSORS1C1Q9UIG5 152 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PACSIN3Q9UKS6 424 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 POMT2Q9UKY4 750 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 SH2B3Q9UQQ2 575 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 COX11Q9Y6N1 276 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PTPRFP10586 1907 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PREX2Q70Z35 1606 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 EFCAB5A4FU69 1503 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 NPIPB5A8MRT5 1133 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 USP17L23D6RBM5 183 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 K7EN84 100 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 M0QZQ0 153 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 ACOT8O14734 319 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 DSCR3O14972 297 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 P2RX6O15547 441 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PRAF2O60831 178 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 SCGNO76038 276 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 IFNW1P05000 195 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 SMIM17P0DL12 118 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 C8orf88P0DMB2 117 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 HIST1H1CP16403 213 aaKnown RBP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 IGFBP2P18065 325 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 MDH2P40926 338 aaKnown RBP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 GABRA2P47869 451 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 GSK3BP49841 420 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 CCL11P51671 97 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF134P52741 427 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 GAS1P54826 345 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 OR10A3P58181 314 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 TAS2R30P59541 319 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 GABARAPL2P60520 117 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 SELENOWP63302 87 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 ARHGAP1Q07960 439 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PLCXD2Q0VAA5 305 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 SMAGPQ0VAQ4 97 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF154Q13106 437 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 FHL3Q13643 280 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 RNPS1Q15287 305 aaKnown RBP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 TCTN1Q2MV58 587 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 LGALSLQ3ZCW2 172 aaPredicted RBP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 KHDC3LQ587J8 217 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 HECTD2Q5U5R9 776 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM236Q5W0B7 351 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PWWP2BQ6NUJ5 590 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PRSS54Q6PEW0 395 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 DHRS11Q6UWP2 260 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PAMR1Q6UXH9 720 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF705AQ6ZN79 300 aaPredicted RBP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 SEM1Q6ZVN7 128 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 MDGA2Q7Z553 956 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 TSEN54Q7Z6J9 526 aaKnown RBP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 IFNEQ86WN2 208 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 UBALD2Q8IYN6 164 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC22A15Q8IZD6 547 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 OR8I2Q8N0Y5 310 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 CFAP52Q8N1V2 620 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 FGFRL1Q8N441 504 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 BPIFB2Q8N4F0 458 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PNPLA1Q8N8W4 532 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 ACOT4Q8N9L9 421 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 Q8NA96 180 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 OR52L1Q8NGH7 329 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 OR10G9Q8NGN4 311 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 OR2Y1Q8NGV0 311 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 FAM110BQ8TC76 370 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 CD99L2Q8TCZ2 262 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 Q8WTZ3 238 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 FCAMRQ8WWV6 532 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 NPIPB3Q92617 1050 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 DYRK2Q92630 601 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PTX4Q96A99 478 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 APH1AQ96BI3 265 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 KCTD7Q96MP8 289 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 GPR82Q96P67 336 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 ACOX2Q99424 681 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 DDOQ99489 341 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 TIMP4Q99727 224 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 AGPAT1Q99943 283 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PSMG3Q9BT73 122 aaPredicted RBP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 HCAR1Q9BXC0 346 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 C1QTNF5Q9BXJ0 243 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 LPAR5Q9H1C0 372 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 CPVLQ9H3G5 476 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 R3HDMLQ9H3Y0 253 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PPDPFQ9H3Y8 114 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 PATZ1Q9HBE1 687 aaKnown RBP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 TXNRD2Q9NNW7 524 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 FBXO6Q9NRD1 293 aaPredicted RBP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 OR1A1Q9P1Q5 309 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 KIAA1456Q9P272 454 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 TESQ9UGI8 421 aaKnown RBP2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 TMED3Q9Y3Q3 217 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 OR51B2Q9Y5P1 312 aa2.72□□□□□ -1.97
SNRNP48-202ENST00000496946 MAP2P11137 1827 aaKnown RBP2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms