RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 SELENOSQ9BQE4 189 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF251Q9BRH9 671 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 C7orf50Q9BRJ6 194 aaKnown RBP3.52□□□□□ -1.85
SF3B1-212ENST00000496458 ACTR3CQ9C0K3 210 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-212ENST00000496458 DEFB129Q9H1M3 183 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 SYT4Q9H2B2 425 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 CAB39LQ9H9S4 337 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 MRM3Q9HC36 420 aaKnown RBP3.52□□□□□ -1.85
SF3B1-212ENST00000496458 IMP3Q9NV31 184 aaKnown RBP3.52□□□□□ -1.85
SF3B1-212ENST00000496458 NECAP2Q9NVZ3 263 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 CD274Q9NZQ7 290 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 DCDC2Q9UHG0 476 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 ERVW-1Q9UQF0 538 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 HYOU1Q9Y4L1 999 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 TSSC4Q9Y5U2 329 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-212ENST00000496458 SCN9AQ15858 1988 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 A0A0A6YYH2 397 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 IGHV7-81A0A0B4J1V7 117 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 A6NJ64 397 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF233A6NK53 670 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 EVPLLA8MZ36 301 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 IDSB3KWA1 339 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 F8VP50 259 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 H7C0C1 242 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 KPNA4O00629 521 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 B4GALT5O43286 388 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 OR7A10O76100 309 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 KLK1P06870 262 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 SMIM10L1P0DMW3 83 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 IGLL1P15814 213 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 TEAD1P28347 426 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 AQP2P41181 271 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 NBL1P41271 181 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 KPNA2P52292 529 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 AP1S2P56377 157 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 RAB14P61106 215 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 RPS15AP62244 130 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 MRPS11P82912 194 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 DAZ2Q13117 558 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 MPPED2Q15777 294 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 PPM1LQ5SGD2 360 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 FAM120AOSQ5T036 256 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 APOBEC3HQ6NTF7 200 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 FAM151BQ6UXP7 276 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF836Q6ZNA1 936 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 ASCL5Q7RTU5 278 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 PAGE2Q7Z2X7 111 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF546Q86UE3 836 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 CMTM1Q8IZ96 169 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 NECAP1Q8NC96 275 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 OR2AP1Q8NGE2 309 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 OR2L8Q8NGY9 312 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 LYPD6BQ8NI32 183 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 GRPEL2Q8TAA5 225 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 TRUB1Q8WWH5 349 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 IL1F10Q8WWZ1 152 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 SRSF12Q8WXF0 261 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 MRPS31Q92665 395 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 APH1AQ96BI3 265 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 SMIM10Q96HG1 83 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 RNF2Q99496 336 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 SRRQ9GZT4 340 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 SLC38A1Q9H2H9 487 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 C1orf198Q9H425 327 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 REEP4Q9H6H4 257 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 FGF20Q9NP95 211 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 DAZ3Q9NR90 486 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF282Q9UDV7 671 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 NXT1Q9UKK6 140 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 SAMD4AQ9UPU9 718 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 ARL2BPQ9Y2Y0 163 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 UTP11Q9Y3A2 253 aaKnown RBP3.51□□□□□ -1.85
SF3B1-212ENST00000496458 RTL9Q8NET4 1388 aa3.51□□□□□ -1.85
SF3B1-212ENST00000496458 A0A1B0GTI1 187 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 EFCAB10A6NFE3 127 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 FABP12A6NFH5 140 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 TRDCB7Z8K6 153 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 E7ESA3 106 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 PRAMEF26H0Y7S4 382 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 KLRC4-KLRK1H3BQV0 150 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 SMLR1H3BR10 107 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 TOX3O15405 576 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 MAGEB4O15481 346 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 SC5DO75845 299 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 SULT1C4O75897 302 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 SUPT7LO94864 414 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 IFNA16P05015 189 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 SERPINA6P08185 405 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 RNH1P13489 461 aaKnown RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 CXCR2P25025 360 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 NTSP30990 170 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 DDOSTP39656 456 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 YAP1P46937 504 aaKnown RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 DAP3P51398 398 aaKnown RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 HNRNPA3P51991 378 aaKnown RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 UBE2MP61081 183 aaKnown RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 RPS14P62263 151 aaKnown RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 IFITM2Q01629 132 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms