RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-223	ENST00000496296		Q6ZSR3	168 aa		18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	PAQR4	Q8N4S7	273 aa	Predicted RBP	18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	GJC3	Q8NFK1	279 aa		18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	OR52N4	Q8NGI2	321 aa		18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	OR51E1	Q8TCB6	317 aa		18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	SNAPC3	Q92966	411 aa		18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	NABP1	Q96AH0	204 aa		18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	SARAF	Q96BY9	339 aa		18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	ALKBH3	Q96Q83	286 aa	Predicted RBP	18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	LINC00470	Q9BZP3	86 aa		18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	CALHM2	Q9HA72	323 aa		18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	ZNF175	Q9Y473	711 aa		18.52	■□□□□ 0.56
FGFR1-223	ENST00000496296	SLC22A20	A6NK97	555 aa		18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	RER1	O15258	196 aa		18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	OR2A4	O95047	310 aa		18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	GIP	P09681	153 aa	Predicted RBP	18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	HTR2B	P41595	481 aa		18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	DHODH	Q02127	395 aa		18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	IKZF1	Q13422	519 aa		18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	FAM27B	Q5VT28	67 aa		18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	OR2A7	Q96R45	310 aa		18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	PRDM14	Q9GZV8	571 aa		18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	MYOZ1	Q9NP98	299 aa	Predicted RBP	18.52	■□□□□ 0.55
FGFR1-223	ENST00000496296	NCOA6	Q14686	2063 aa	Predicted RBP	18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	RAB27B	O00194	218 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	SNAPC5	O75971	98 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	CD3D	P04234	171 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	VSIG10L2	P0DP72	767 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	ANXA7	P20073	488 aa	Known RBP	18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	DNASE1	P24855	282 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	CX3CR1	P49238	355 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	SNRPD2	P62316	118 aa	Known RBP	18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	ENDOG	Q14249	297 aa	Known RBP	18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	ZNF260	Q3ZCT1	412 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	DOK3	Q7L591	496 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	ZNF627	Q7L945	461 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	OR2W3	Q7Z3T1	314 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	LRRC18	Q8N456	261 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	OR4D10	Q8NGI6	311 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	NKX3-1	Q99801	234 aa	Predicted RBP	18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	GINS4	Q9BRT9	223 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	GPR35	Q9HC97	309 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	PIPOX	Q9P0Z9	390 aa		18.51	■□□□□ 0.55
FGFR1-223	ENST00000496296	TMEM14DP	A8MWL7	114 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296		K7ENP7	123 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	ERVH48-1	M5A8F1	160 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	TPO	P07202	933 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	ZNF20	P17024	532 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	MPZ	P25189	248 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	GNAL	P38405	381 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	UNC119	Q13432	240 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	CEACAM16	Q2WEN9	425 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	INO80C	Q6PI98	192 aa	Predicted RBP	18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	PLXDC2	Q6UX71	529 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	OR5AS1	Q8N127	324 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	SSC4D	Q8WTU2	575 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	FAM46B	Q96A09	425 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	GP6	Q9HCN6	339 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	TMEM38B	Q9NVV0	291 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	PRKX	P51817	358 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	MOGAT2	Q3SYC2	334 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	P4HA3	Q7Z4N8	544 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	CCDC54	Q8NEL0	328 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	APH1A	Q96BI3	265 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	ZNF837	Q96EG3	531 aa	Predicted RBP	18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	FOXB1	Q99853	325 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	SLC25A21	Q9BQT8	299 aa	Predicted RBP	18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	ZNF319	Q9P2F9	582 aa		18.5	■□□□□ 0.55
FGFR1-223	ENST00000496296	PDGFA	P04085	211 aa		18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	VSIG8	P0DPA2	414 aa		18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	OTX1	P32242	354 aa	Predicted RBP	18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	RAP2B	P61225	183 aa		18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	TSPO2	Q5TGU0	170 aa		18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	RPUSD3	Q6P087	351 aa	Known RBP	18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	OR51S1	Q8NGJ8	323 aa		18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	TAAR6	Q96RI8	345 aa		18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	GPR84	Q9NQS5	396 aa		18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	B3GNT2	Q9NY97	397 aa		18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	MGAT4C	Q9UBM8	478 aa		18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	UPB1	Q9UBR1	384 aa		18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296	ELF5	Q9UKW6	265 aa	Predicted RBP	18.49	■□□□□ 0.55
FGFR1-223	ENST00000496296		A0A0U1RQV5	110 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	WIPF3	A6NGB9	483 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	RAB3D	O95716	219 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	CST2	P09228	141 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	STK11	Q15831	433 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	ZBTB37	Q5TC79	503 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	OR10K2	Q6IF99	312 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	ZNF100	Q8IYN0	542 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	OR13C9	Q8NGT0	318 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	PLSCR2	Q9NRY7	297 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	SLC23A1	Q9UHI7	598 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	USP24	Q9UPU5	2620 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	FARS2	O95363	451 aa	Known RBP	18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	CRYAB	P02511	175 aa	Known RBP	18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	ZNF735	P0CB33	412 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	UCN	P55089	124 aa		18.48	■□□□□ 0.55
FGFR1-223	ENST00000496296	PER3	P56645	1201 aa		18.48	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms