RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ARRDC1Q8N5I2 433 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 SMOC1Q9H4F8 434 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 PCDHGA1Q9Y5H4 931 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 E9PLN8 166 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 IL2RAP01589 272 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 PMP2P02689 132 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 SERPINA7P05543 415 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 RRASP10301 218 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 NAT1P18440 290 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 CYB561P49447 251 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 AP2S1P53680 142 aaPredicted RBP9.72□□□□□ -0.85
CMSS1-208ENST00000496116 TAS2R31P59538 309 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 RPS27AP62979 156 aaKnown RBP9.72□□□□□ -0.85
CMSS1-208ENST00000496116 SRSF4Q08170 494 aaKnown RBP9.72□□□□□ -0.85
CMSS1-208ENST00000496116 Q0VFX4 171 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 PPP1R1AQ13522 171 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 ARFRP1Q13795 201 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 ARL6IP1Q15041 203 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 ACER2Q5QJU3 275 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 H3F3CQ6NXT2 135 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 GPR137CQ8N3F9 429 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 ESX1Q8N693 406 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 OR51T1Q8NGJ9 327 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 CT55Q8WUE5 264 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 TAAR9Q96RI9 348 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 ANAPC10Q9UM13 185 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 PIGLQ9Y2B2 252 aa9.72□□□□□ -0.85
CMSS1-208ENST00000496116 C9orf170A2RU37 121 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 OR5H14A6NHG9 310 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 STMND1H3BQB6 276 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 SGCEO43556 437 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 B3GALNT1O75752 331 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 TRAPPC6AO75865 159 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 FAHP16930 419 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 HLA-GP17693 338 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 CAMK2BQ13554 666 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 RAB35Q15286 201 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 VAX1Q5SQQ9 334 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 DRAM2Q6UX65 266 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 DBX2Q6ZNG2 339 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 Q6ZSR3 168 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 RAB11FIP2Q7L804 512 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 SCARB1Q8WTV0 552 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 MITD1Q8WV92 249 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 HAS2Q92819 552 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 MRGPRFQ96AM1 343 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 FBXO17Q96EF6 278 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 CPNE2Q96FN4 548 aaPredicted RBP9.71□□□□□ -0.85
CMSS1-208ENST00000496116 LIN37Q96GY3 246 aaPredicted RBP9.71□□□□□ -0.85
CMSS1-208ENST00000496116 OCSTAMPQ9BR26 566 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 MRPS18CQ9Y3D5 142 aaKnown RBP9.71□□□□□ -0.85
CMSS1-208ENST00000496116 SDK2Q58EX2 2172 aa9.71□□□□□ -0.85
CMSS1-208ENST00000496116 A0A0D9SG52 128 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 A0A0G2JMM0 328 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 A0A1W2PP11 408 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 A0A1W2PPB8 328 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 A0A1W2PRS3 328 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 DHRS7CA6NNS2 312 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 KIR3DP1A8MWS1 328 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 I3L521 148 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 MFNGO00587 321 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 PDGFAP04085 211 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 CST2P09228 141 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 JMJD7P0C870 316 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 LIPCP11150 499 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 NAT2P11245 290 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 MPLP40238 635 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 TMEM50BP56557 158 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 SCRN3Q0VDG4 424 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 UBE2V2Q15819 145 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 MICBQ29980 383 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 RSPO1Q2MKA7 263 aaPredicted RBP9.71□□□□□ -0.86
CMSS1-208ENST00000496116 SFRP5Q5T4F7 317 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 RTL6Q6ICC9 239 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 TMEM65Q6PI78 240 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 RFPL4BQ6ZWI9 263 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF546Q86UE3 836 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 GGNQ86UU5 652 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 TMEM17Q86X19 198 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 FAM89BQ8N5H3 189 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 OR5D18Q8NGL1 313 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 OR6K3Q8NGY3 331 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 OR2V1Q8NHB1 315 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 TERB2Q8NHR7 220 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 CPT1CQ8TCG5 803 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 NPRL2Q8WTW4 380 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 PCNPQ8WW12 178 aaKnown RBP9.71□□□□□ -0.86
CMSS1-208ENST00000496116 FBXW5Q969U6 566 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 ARHGAP5-AS1Q96IT6 56 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 SCGB3A2Q96PL1 93 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 DDA1Q9BW61 102 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 CRLF2Q9HC73 371 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.71□□□□□ -0.862e-6■■■■□ 20.1
CMSS1-208ENST00000496116 P4HTMQ9NXG6 502 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF224Q9NZL3 707 aa9.71□□□□□ -0.86
CMSS1-208ENST00000496116 TRAV14DV4A0A0A6YYC5 116 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 C5orf63A6NC05 138 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 OR2AT4A6NND4 320 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF716A6NP11 495 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 SHOXO15266 292 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms