RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ENSAO43768 121 aaKnown RBP20.17■□□□□ 0.82
HLA-C-209ENST00000495835 NAA10P41227 235 aaPredicted RBP20.17■□□□□ 0.82
HLA-C-209ENST00000495835 PSMA6P60900 246 aaKnown RBP20.17■□□□□ 0.82
HLA-C-209ENST00000495835 ATP6AP1Q15904 470 aa20.17■□□□□ 0.82
HLA-C-209ENST00000495835 KRT74Q7RTS7 529 aa20.17■□□□□ 0.82
HLA-C-209ENST00000495835 KRT77Q7Z794 578 aa20.17■□□□□ 0.82
HLA-C-209ENST00000495835 BBS1Q8NFJ9 593 aa20.17■□□□□ 0.82
HLA-C-209ENST00000495835 OR1M1Q8NGA1 313 aa20.17■□□□□ 0.82
HLA-C-209ENST00000495835 C22orf15Q8WYQ4 148 aa20.17■□□□□ 0.82
HLA-C-209ENST00000495835 MS4A7Q9GZW8 240 aaPredicted RBP20.17■□□□□ 0.82
HLA-C-209ENST00000495835 BRD7Q9NPI1 651 aa20.17■□□□□ 0.82
HLA-C-209ENST00000495835 ENOPH1Q9UHY7 261 aa20.17■□□□□ 0.82
HLA-C-209ENST00000495835 ANXA2P2A6NMY6 339 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 G3V2T6 193 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 HAX1O00165 279 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 ZNF254O75437 659 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 PLATP00750 562 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 CST4P01036 141 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 MUC1P15941 1255 aaPredicted RBP20.16■□□□□ 0.82
HLA-C-209ENST00000495835 FASP25445 335 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 UBA52P62987 128 aaKnown RBP20.16■□□□□ 0.82
HLA-C-209ENST00000495835 SFRP4Q6FHJ7 346 aaPredicted RBP20.16■□□□□ 0.82
HLA-C-209ENST00000495835 C11orf53Q8IXP5 236 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 C19orf18Q8NEA5 215 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 ASB17Q8WXJ9 295 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 GCDHQ92947 438 aaPredicted RBP20.16■□□□□ 0.82
HLA-C-209ENST00000495835 MICU1Q9BPX6 476 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 TLNRD1Q9H1K6 362 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 ESM1Q9NQ30 184 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 RHBDD3Q9Y3P4 386 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 LRP12Q9Y561 859 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 TENM1Q9UKZ4 2725 aa20.16■□□□□ 0.82
HLA-C-209ENST00000495835 A0A0U1RQV5 110 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 hCG_1807616A0A1W2PRN6 198 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 C3orf80F5H4A9 247 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 MTNR1AP48039 350 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 ROM1Q03395 351 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 GFOD2Q3B7J2 385 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 ZNF826PQ6ZT77 177 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 SIGLECL1Q8N7X8 197 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 BOLLQ8N9W6 283 aaKnown RBP20.15■□□□□ 0.82
HLA-C-209ENST00000495835 ITPKCQ96DU7 683 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 RTL8AQ9BWD3 113 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 PAPOLGQ9BWT3 736 aaKnown RBP20.15■□□□□ 0.82
HLA-C-209ENST00000495835 MROQ9BYG7 248 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 KRT84Q9NSB2 600 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 AP4S1Q9Y587 144 aa20.15■□□□□ 0.82
HLA-C-209ENST00000495835 TMEM210A6NLX4 147 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 ADAM20O43506 726 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 ECDO95905 644 aaPredicted RBP20.14■□□□□ 0.81
HLA-C-209ENST00000495835 FCGR1AP12314 374 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 ATP6V1B1P15313 513 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 PRTN3P24158 256 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 EFNB1P98172 346 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 MICBQ29980 383 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 FAM76BQ5HYJ3 339 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 KDM4DQ6B0I6 523 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 WDR86Q86TI4 376 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 FAM90A1Q86YD7 464 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 ZDHHC13Q8IUH4 622 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 C12orf43Q96C57 262 aaKnown RBP20.14■□□□□ 0.81
HLA-C-209ENST00000495835 DMRTB1Q96MA1 342 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 TECTBQ96PL2 329 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 MNTQ99583 582 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 GABARAPL1Q9H0R8 117 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 CTSZQ9UBR2 303 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 KLHDC2Q9Y2U9 406 aa20.14■□□□□ 0.81
HLA-C-209ENST00000495835 NXNL2Q5VZ03 156 aa20.13■□□□□ 0.81
HLA-C-209ENST00000495835 WDR82Q6UXN9 313 aa20.13■□□□□ 0.81
HLA-C-209ENST00000495835 ZNF679Q8IYX0 411 aa20.13■□□□□ 0.81
HLA-C-209ENST00000495835 PNLDC1Q8NA58 520 aaKnown RBP20.13■□□□□ 0.81
HLA-C-209ENST00000495835 OR8B12Q8NGG6 310 aa20.13■□□□□ 0.81
HLA-C-209ENST00000495835 OR10Z1Q8NGY1 313 aa20.13■□□□□ 0.81
HLA-C-209ENST00000495835 H2AFY2Q9P0M6 372 aaPredicted RBP20.13■□□□□ 0.81
HLA-C-209ENST00000495835 CCDC182A6NF36 153 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 SLC22A31A6NKX4 558 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 C22orf46C9J442 243 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 CLDN34H7C241 214 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 GPR37O15354 613 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 IGHV4-38-2P0DP08 117 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 MAP2K3P46734 347 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 ACTR3P61158 418 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 C1orf146Q5VVC0 180 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 SLX4IPQ5VYV7 408 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 MEPCEQ7L2J0 689 aaKnown RBP20.12■□□□□ 0.81
HLA-C-209ENST00000495835 LRRC29Q8WV35 223 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 OR5P3Q8WZ94 311 aa20.12■□□□□ 0.81
HLA-C-209ENST00000495835 TMEM269A0A1B0GVZ9 245 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 ZAR1LA6NP61 321 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 SRRM5B3KS81 715 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 ZNF879B4DU55 563 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 PRKYO43930 277 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 GYPAP02724 150 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 ACKR3P25106 362 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 PRDX4Q13162 271 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 BCL6BQ8N143 479 aaPredicted RBP20.11■□□□□ 0.81
HLA-C-209ENST00000495835 TMEM163Q8TC26 289 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 LYZL4Q96KX0 146 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 HIST1H2AAQ96QV6 131 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 OR8B4Q96RC9 309 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms