RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 OR2S2Q9NQN1 319 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 FBLN5Q9UBX5 448 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 CACNA1EQ15878 2313 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 FGF16O43320 207 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 TBPP20226 339 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 SUMO3P55854 103 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-217ENST00000495688 PRAMEF20Q5VT98 475 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 AADACL3Q5VUY0 350 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 DRAM2Q6UX65 266 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 CBLN2Q8IUK8 224 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 NUBPLQ8TB37 319 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 MRGPRX4Q96LA9 322 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 NMES1Q9C002 83 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 TGIF2Q9GZN2 237 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 FANCFQ9NPI8 374 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 SDHAF3Q9NRP4 125 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 SEMA5BQ9P283 1151 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 SRPK3Q9UPE1 567 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 TRBV6-7A0A0A0MS04 114 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 MFNGO00587 321 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 SCGNO76038 276 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 GSTP1P09211 210 aaKnown RBP11.47□□□□□ -0.57
PTPN7-217ENST00000495688 NAT2P11245 290 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 TPT1P13693 172 aaKnown RBP11.47□□□□□ -0.57
PTPN7-217ENST00000495688 AMY2BP19961 511 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 GSK3AP49840 483 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 AIMP2Q13155 320 aaKnown RBP11.47□□□□□ -0.57
PTPN7-217ENST00000495688 PABPC1L2AQ5JQF8 200 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 LCN10Q6JVE6 187 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 CRIP3Q6Q6R5 217 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 FOXRED2Q8IWF2 684 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 OR4A4PQ8NGN8 299 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 TLNRD1Q9H1K6 362 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 SLC6A15Q9H2J7 730 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 ZNF768Q9H5H4 540 aaKnown RBP11.47□□□□□ -0.57
PTPN7-217ENST00000495688 WIF1Q9Y5W5 379 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 FLVCR1Q9Y5Y0 555 aa11.47□□□□□ -0.57
PTPN7-217ENST00000495688 SFT2D2O95562 160 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 IL32P24001 234 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 RAB32Q13637 225 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 TMEM176BQ3YBM2 270 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-217ENST00000495688 VAX1Q5SQQ9 334 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 SLC25A47Q6Q0C1 308 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 SLC30A7Q8NEW0 376 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 CADM4Q8NFZ8 388 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 OR51T1Q8NGJ9 327 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 OR5H2Q8NGV7 314 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 STOML3Q8TAV4 291 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 GSKIPQ9P0R6 139 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 MYOTQ9UBF9 498 aa11.46□□□□□ -0.57
PTPN7-217ENST00000495688 PURGQ9UJV8 347 aaKnown RBP11.46□□□□□ -0.57
PTPN7-217ENST00000495688 IGLV3-12A0A075B6K2 115 aa11.46□□□□□ -0.58
PTPN7-217ENST00000495688 ETV2O00321 342 aaPredicted RBP11.46□□□□□ -0.58
PTPN7-217ENST00000495688 HOXB5P09067 269 aa11.46□□□□□ -0.58
PTPN7-217ENST00000495688 SRFP11831 508 aa11.46□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF43P17038 809 aa11.46□□□□□ -0.58
PTPN7-217ENST00000495688 SNU13P55769 128 aaKnown RBP11.46□□□□□ -0.58
PTPN7-217ENST00000495688 TAS2R31P59538 309 aa11.46□□□□□ -0.58
PTPN7-217ENST00000495688 CCDC36Q8IYA8 594 aa11.46□□□□□ -0.58
PTPN7-217ENST00000495688 CARFQ8N187 725 aa11.46□□□□□ -0.58
PTPN7-217ENST00000495688 ARRDC1Q8N5I2 433 aa11.46□□□□□ -0.58
PTPN7-217ENST00000495688 LYZL4Q96KX0 146 aa11.46□□□□□ -0.58
PTPN7-217ENST00000495688 METTL8Q9H825 291 aaKnown RBP11.46□□□□□ -0.58
PTPN7-217ENST00000495688 ANAPC10Q9UM13 185 aa11.46□□□□□ -0.58
PTPN7-217ENST00000495688 RAB19A4D1S5 217 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 F5H5K5 113 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 GDF9O60383 454 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 KNG1P01042 644 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 FAM157CP0CG43 387 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 SERPINA2P20848 420 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 KISS1Q15726 138 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF585AQ6P3V2 769 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 GALNTL5Q7Z4T8 443 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 NUDT16L1Q9BRJ7 211 aaKnown RBP11.45□□□□□ -0.58
PTPN7-217ENST00000495688 OR10A2Q9H208 303 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 SAV1Q9H4B6 383 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-217ENST00000495688 MOB1AQ9H8S9 216 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 HPF1Q9NWY4 346 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 FAM96BQ9Y3D0 163 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 IGKV1D-8A0A087WSZ0 117 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 F8W036 122 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 STMND1H3BQB6 276 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 SCRG1O75711 98 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 CD79AP11912 226 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 BLVRBP30043 206 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-217ENST00000495688 OR3A2P47893 321 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 CSNK2A1P68400 391 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-217ENST00000495688 BLOC1S1P78537 153 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 WDR74Q6RFH5 385 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-217ENST00000495688 UQCC3Q6UW78 93 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 IQCF2Q8IXL9 164 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 WDSUB1Q8N9V3 476 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 PNLDC1Q8NA58 520 aaKnown RBP11.45□□□□□ -0.58
PTPN7-217ENST00000495688 CSNK2A3Q8NEV1 391 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 OR2M3Q8NG83 312 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 OR56B1Q8NGI3 324 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 OR14K1Q8NGZ2 314 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 RNF138Q8WVD3 245 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 OCSTAMPQ9BR26 566 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms