RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ZMYND11Q15326 602 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 TMEM155Q4W5P6 130 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 THAP5Q7Z6K1 395 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 LRRC28Q86X40 367 aaPredicted RBP13.41□□□□□ -0.26
LIME1-209ENST00000494776 PACRGLQ8N7B6 248 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 BOLLQ8N9W6 283 aaKnown RBP13.41□□□□□ -0.26
LIME1-209ENST00000494776 PLPP7Q8NBV4 271 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 RHOXF1Q8NHV9 184 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 CYGBQ8WWM9 190 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 PPP1R14AQ96A00 147 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 HIST1H2AAQ96QV6 131 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 MICU1Q9BPX6 476 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 ABCB9Q9NP78 766 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 GPR84Q9NQS5 396 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 LPAR3Q9UBY5 353 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 PCDHGB1Q9Y5G3 927 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 MPC1Q9Y5U8 109 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 TANC2Q9HCD6 1990 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 PPIAL4EA0A075B759 164 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 hCG_1807616A0A1W2PRN6 198 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 ZNF850A8MQ14 1090 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 PPIAL4DF5H284 164 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 MTRF1O75570 445 aaKnown RBP13.4□□□□□ -0.26
LIME1-209ENST00000494776 SULT1C4O75897 302 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 PNPP00491 289 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 PPIAL4FP0DN26 164 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 ATP6V1B1P15313 513 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 ACKR3P25106 362 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 PRDX4Q13162 271 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 CR1LQ2VPA4 569 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 FAM120AOSQ5T036 256 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 KCTD8Q6ZWB6 473 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 SEMA6DQ8NFY4 1073 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 Q8TCH9 128 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 TMEM186Q96B77 213 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 RTL8AQ9BWD3 113 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 HIF1ANQ9NWT6 349 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 C1orf123Q9NWV4 160 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 RNF7Q9UBF6 113 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 GNG8Q9UK08 70 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 PPIAL4AQ9Y536 164 aa13.4□□□□□ -0.26
LIME1-209ENST00000494776 TRAV20A0A0B4J274 112 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 ZNF816-ZNF321PA0A0X1KG74 233 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 SRSF10O75494 262 aaKnown RBP13.39□□□□□ -0.27
LIME1-209ENST00000494776 CST4P01036 141 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 TTRP02766 147 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 GABRB1P18505 474 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 ZNF85Q03923 595 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 ZNF91Q05481 1191 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 RIPPLY1Q0D2K3 151 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 TP53I3Q53FA7 332 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 FAM201AQ5SY85 155 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 LIPNQ5VXI9 398 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 TTC23Q5W5X9 447 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 ZDHHC23Q8IYP9 409 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 ELMOD2Q8IZ81 293 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 ITFG2Q969R8 447 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 MRPL48Q96GC5 212 aaKnown RBP13.39□□□□□ -0.27
LIME1-209ENST00000494776 MYCBPQ99417 103 aaPredicted RBP13.39□□□□□ -0.27
LIME1-209ENST00000494776 VCXQ9H320 206 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 PPP1R3EQ9H7J1 279 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 DCLRE1BQ9H816 532 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 PATZ1Q9HBE1 687 aaKnown RBP13.39□□□□□ -0.27
LIME1-209ENST00000494776 AMBNQ9NP70 447 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 G6PC2Q9NQR9 355 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 PIGLQ9Y2B2 252 aa13.39□□□□□ -0.27
LIME1-209ENST00000494776 JMJD1CQ15652 2540 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 P2RY10O00398 339 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 PLPP2O43688 288 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 PTBP3O95758 552 aaKnown RBP13.38□□□□□ -0.27
LIME1-209ENST00000494776 DBTP11182 482 aaKnown RBP13.38□□□□□ -0.27
LIME1-209ENST00000494776 ELF3P78545 371 aaPredicted RBP13.38□□□□□ -0.27
LIME1-209ENST00000494776 ODF4Q2M2E3 257 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 FAHD2BQ6P2I3 314 aaPredicted RBP13.38□□□□□ -0.27
LIME1-209ENST00000494776 ZNF826PQ6ZT77 177 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 IL17RELQ6ZVW7 336 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 DHRSXQ8N5I4 330 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 ACBD7Q8N6N7 88 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 DEFB108BQ8NET1 73 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 OR1M1Q8NGA1 313 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 LGALS12Q96DT0 336 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 FAHD2AQ96GK7 314 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 RNF170Q96K19 258 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 ADI1Q9BV57 179 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 TMEM165Q9HC07 324 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 MIOXQ9UGB7 285 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 ENPP5Q9UJA9 477 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 SLC22A13Q9Y226 551 aa13.38□□□□□ -0.27
LIME1-209ENST00000494776 EXOGQ9Y2C4 368 aaKnown RBP13.38□□□□□ -0.27
LIME1-209ENST00000494776 RPL36Q9Y3U8 105 aaKnown RBP13.38□□□□□ -0.27
LIME1-209ENST00000494776 FN1P02751 2386 aaKnown RBP13.37□□□□□ -0.27
LIME1-209ENST00000494776 CEACAM18A8MTB9 384 aa13.37□□□□□ -0.27
LIME1-209ENST00000494776 DLGAP1O14490 977 aa13.37□□□□□ -0.27
LIME1-209ENST00000494776 FOXH1O75593 365 aa13.37□□□□□ -0.27
LIME1-209ENST00000494776 DHRS3O75911 302 aa13.37□□□□□ -0.27
LIME1-209ENST00000494776 FADS2O95864 444 aaKnown RBP13.37□□□□□ -0.27
LIME1-209ENST00000494776 RPS2P15880 293 aaKnown RBP13.37□□□□□ -0.27
LIME1-209ENST00000494776 LCN2P80188 198 aa13.37□□□□□ -0.27
LIME1-209ENST00000494776 KCNJ8Q15842 424 aa13.37□□□□□ -0.27
LIME1-209ENST00000494776 ESCO2Q56NI9 601 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms