RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 H0YIG0 161 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 SYT7O43581 403 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 H2BFMP0C1H6 154 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 GP1BBP13224 206 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 ZNF823P16415 610 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 MAS1LP35410 378 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 S100A10P60903 97 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 C9orf40Q8IXQ3 194 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 GPR119Q8TDV5 335 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 BANF2Q9H503 90 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 PNO1Q9NRX1 252 aaKnown RBP13.57□□□□□ -0.24
SDF4-207ENST00000494748 KIR2DS5A0A0G2JLQ3 304 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 A0A0G2JNG1 304 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 KIR2DS3K7RE56 304 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 S100A6P06703 90 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 HOXB5P09067 269 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 PRF1P14222 555 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 MYOGP15173 224 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 PPM1FP49593 454 aaPredicted RBP13.57□□□□□ -0.24
SDF4-207ENST00000494748 KIR2DS5Q14953 304 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 EIF5AL1Q6IS14 154 aaKnown RBP13.57□□□□□ -0.24
SDF4-207ENST00000494748 SLC25A43Q8WUT9 341 aaPredicted RBP13.57□□□□□ -0.24
SDF4-207ENST00000494748 TSLPQ969D9 159 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 SLAMF6Q96DU3 332 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 OR8D2Q9GZM6 311 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 CENPMQ9NSP4 180 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 C10orf142B7Z368 130 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 NDUFS6O75380 124 aaKnown RBP13.56□□□□□ -0.24
SDF4-207ENST00000494748 DEDDO75618 318 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 FBP1P09467 338 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 PET100P0DJ07 73 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 RPL12P30050 165 aaKnown RBP13.56□□□□□ -0.24
SDF4-207ENST00000494748 FAM3AP98173 230 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 TCEAL7Q9BRU2 100 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 PARP12Q9H0J9 701 aaKnown RBP13.56□□□□□ -0.24
SDF4-207ENST00000494748 GSKIPQ9P0R6 139 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 TUBD1Q9UJT1 453 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 MRPS28Q9Y2Q9 187 aaKnown RBP13.56□□□□□ -0.24
SDF4-207ENST00000494748 IGKV3D-11A0A0A0MRZ8 115 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 SDCBPO00560 298 aaPredicted RBP13.56□□□□□ -0.24
SDF4-207ENST00000494748 SNRNP70P08621 437 aaKnown RBP13.56□□□□□ -0.24
SDF4-207ENST00000494748 HOXB2P14652 356 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 NQO2P16083 231 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 PGCP20142 388 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 EIF5AP63241 154 aaKnown RBP13.56□□□□□ -0.24
SDF4-207ENST00000494748 HHEXQ03014 270 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 HMGN3Q15651 99 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 OR5D14Q8NGL3 314 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 FGF14Q92915 247 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 ERGIC1Q969X5 290 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 SPSB2Q99619 263 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 MESP1Q9BRJ9 268 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 CUTCQ9NTM9 273 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 FER1L5A0AVI2 2057 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 IFITM10A6NMD0 228 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 HTR3BO95264 441 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 NUDT14O95848 222 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 MPIG6BO95866 241 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 TMEM33P57088 247 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 C9orf50Q5SZB4 431 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 ZNF101Q8IZC7 436 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 MAP3K3Q99759 626 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 ZNF319Q9P2F9 582 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 MYO7BQ6PIF6 2116 aa13.56□□□□□ -0.24
SDF4-207ENST00000494748 FIGNL2A6NMB9 653 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 FCGR2CP31995 323 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 HAAOP46952 286 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 YPEL5P62699 121 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 MIDNQ504T8 468 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 OR5H2Q8NGV7 314 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 OR51E1Q8TCB6 317 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 C11orf40Q8WZ69 217 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 GNRHR2Q96P88 292 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 LAP3P28838 519 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 GLP1RP43220 463 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 HTR5AP47898 357 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 ZP4Q12836 540 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 UBAC2Q8NBM4 344 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 HPSE2Q8WWQ2 592 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 MRGPRX1Q96LB2 322 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 GAL3ST4Q96RP7 486 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 C20orf24Q9BUV8 137 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 RAB33BQ9H082 229 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 KLHL13Q9P2N7 655 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 MSTNO14793 375 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 TXNL1O43396 289 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 ZNF14P17017 642 aaPredicted RBP13.55□□□□□ -0.24
SDF4-207ENST00000494748 EIF2S3P41091 472 aaKnown RBP13.55□□□□□ -0.24
SDF4-207ENST00000494748 PARM1Q6UWI2 310 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 TMEM151BQ8IW70 566 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 FOXRED2Q8IWF2 684 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 FAM89BQ8N5H3 189 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 LMAN1LQ9HAT1 526 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 WFDC1Q9HC57 220 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.55□□□□□ -0.24
SDF4-207ENST00000494748 MED29Q9NX70 200 aa13.55□□□□□ -0.24
SDF4-207ENST00000494748 F5P12259 2224 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 SPAG17Q6Q759 2223 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 JTBO76095 146 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 KRBOX4Q5JUW0 171 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 640.6 ms