RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SPSB4Q96A44 273 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 UPRTQ96BW1 309 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 SLC7A6OSQ96CW6 309 aaPredicted RBP7.97□□□□□ -1.13
MSH5-218ENST00000494646 CCL13Q99616 98 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 OR10A2Q9H208 303 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 SP140LQ9H930 580 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 MARCH7Q9H992 704 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 SMURF1Q9HCE7 757 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 TVP23BQ9NYZ1 205 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 A0A1B0GW55 424 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 ZNF850A8MQ14 1090 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DYNC1I1O14576 645 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DVL1O14640 695 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 CDIPTO14735 213 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 PHYHO14832 338 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 TMPRSS2O15393 492 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 NDUFA2O43678 99 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 FKBP6O75344 327 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 FCN3O75636 299 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 TIPRLO75663 272 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 TOX4O94842 621 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 PLATP00750 562 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 APOC1P02654 83 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DUX4L2P0CJ85 424 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DUX4L3P0CJ86 424 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DUX4L4P0CJ87 422 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DUX4L5P0CJ88 424 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DUX4L6P0CJ89 424 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DUX4L7P0CJ90 424 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 PPIAL4GP0DN37 164 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 ANXA8P13928 327 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 OPRL1P41146 370 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 MTNR1AP48039 350 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 NPY4RP50391 375 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 PSMA6P60900 246 aaKnown RBP7.96□□□□□ -1.14
MSH5-218ENST00000494646 CSNK2BP67870 215 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 MZT1Q08AG7 82 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 FOXL1Q12952 345 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 APOFQ13790 326 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 GK3PQ14409 553 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 SNAPC1Q16533 368 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DEFB112Q30KQ8 113 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 CD276Q5ZPR3 534 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DUX4L9Q6RFH8 374 aaPredicted RBP7.96□□□□□ -1.14
MSH5-218ENST00000494646 KCTD8Q6ZWB6 473 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 BTN2A1Q7KYR7 527 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 FAM90A1Q86YD7 464 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 OR5T2Q8NGG2 359 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 OR52H1Q8NGJ2 320 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 ST8SIA4Q92187 359 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 PIGCQ92535 297 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 OPA3Q9H6K4 179 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 DUX4Q9UBX2 424 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 POMPQ9Y244 141 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 KLHDC2Q9Y2U9 406 aa7.96□□□□□ -1.14
MSH5-218ENST00000494646 CENPVL3A0A0U1RRI6 287 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 hCG_38984A0A1B0GV85 526 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 ARRDC5A6NEK1 342 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 ZNF879B4DU55 563 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 GSC2O15499 205 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 HOXA3O43365 443 aaPredicted RBP7.95□□□□□ -1.14
MSH5-218ENST00000494646 ENSAO43768 121 aaKnown RBP7.95□□□□□ -1.14
MSH5-218ENST00000494646 DNAJC8O75937 253 aaPredicted RBP7.95□□□□□ -1.14
MSH5-218ENST00000494646 TFF1P04155 84 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 MRPL3P09001 348 aaKnown RBP7.95□□□□□ -1.14
MSH5-218ENST00000494646 OMGP23515 440 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 ACKR3P25106 362 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 CFHR2P36980 270 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 DAPP51397 102 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 CRISP1P54107 249 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 PRDX4Q13162 271 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 DNAL1Q4LDG9 190 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 DMRTC1Q5HYR2 192 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 GPR157Q5UAW9 335 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 TEX36Q5VZQ5 186 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 WDR82Q6UXN9 313 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 KRT77Q7Z794 578 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 PDZD9Q8IXQ8 264 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 CSNK2A3Q8NEV1 391 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 RPL3LQ92901 407 aaKnown RBP7.95□□□□□ -1.14
MSH5-218ENST00000494646 LHX4Q969G2 390 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 PPP1R14AQ96A00 147 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 SLC25A28Q96A46 364 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 RNF170Q96K19 258 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 LYZL4Q96KX0 146 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 TBX15Q96SF7 602 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 TEAD3Q99594 435 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 MICU1Q9BPX6 476 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 PAPOLGQ9BWT3 736 aaKnown RBP7.95□□□□□ -1.14
MSH5-218ENST00000494646 TTTY10Q9BZA0 68 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 YY1AP1Q9H869 796 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 RNPEPL1Q9HAU8 725 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 TRIM36Q9NQ86 728 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 SNTG1Q9NSN8 517 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 DNAJB9Q9UBS3 223 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 DNAJB11Q9UBS4 358 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 LAMP5Q9UJQ1 280 aa7.95□□□□□ -1.14
MSH5-218ENST00000494646 TCRBV3S1A0A5B6 114 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 ANXA2P2A6NMY6 339 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 P2RY10O00398 339 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms