RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ZNF93P35789 620 aaPredicted RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 TALDO1P37837 337 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 WNT5AP41221 380 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 MAP2K3P46734 347 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 ID4P47928 161 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 EFNB2P52799 333 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 DEFA1P59665 94 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 DEFA3P59666 94 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 ZP1P60852 638 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 SSBP1Q04837 148 aaKnown RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 SPOCK1Q08629 439 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 UNC119Q13432 240 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 DYRK1AQ13627 763 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 KLF9Q13886 244 aaPredicted RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 IL18Q14116 193 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 KISS1Q15726 138 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 GSG1Q2KHT4 349 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 HIKESHIQ53FT3 197 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 PYDC2Q56P42 97 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 ZNF474Q6S9Z5 364 aaPredicted RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 FAM180AQ6UWF9 173 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 FBXW12Q6X9E4 464 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 BEND4Q6ZU67 534 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 RNF144BQ7Z419 303 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 P4HA3Q7Z4N8 544 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 LUZP2Q86TE4 346 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 MDP1Q86V88 176 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 ZNF610Q8N9Z0 462 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 KDF1Q8NAX2 398 aaPredicted RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 NAXEQ8NCW5 288 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 SEMA6DQ8NFY4 1073 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 ZNF671Q8TAW3 534 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 NANOS1Q8WY41 292 aaKnown RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 AKAP1Q92667 903 aaKnown RBP eCLIP5.87□□□□□ -1.47
MSH5-217ENST00000494458 SNRNP40Q96DI7 357 aaKnown RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 WBP1Q96G27 269 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 SFXN3Q9BWM7 321 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 C11orf54Q9H0W9 315 aaPredicted RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 OR10A4Q9H209 315 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 C12orf49Q9H741 205 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 MOV10Q9HCE1 1003 aaKnown RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.87□□□□□ -1.47
MSH5-217ENST00000494458 RBFOX1Q9NWB1 397 aaKnown RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 ZNF107Q9UII5 783 aaPredicted RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 PIGLQ9Y2B2 252 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 ARHGAP21Q5T5U3 1957 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 DOCK7Q96N67 2140 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 GTF3C1Q12789 2109 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 A8MXE2 369 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 H3BSH0 61 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 H7C417 338 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 MSTNO14793 375 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 ORC5O43913 435 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 SCGNO76038 276 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 TPOP07202 933 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 CHRM2P08172 466 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 TMIGD3P0DMS9 266 aaPredicted RBP5.86□□□□□ -1.47
MSH5-217ENST00000494458 ZNF20P17024 532 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 SLC6A1P30531 599 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 BTCP35070 178 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 GNALP38405 381 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 PTGFRP43088 359 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 SLC6A9P48067 706 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 PLP2Q04941 152 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 GK2Q14410 553 aaPredicted RBP5.86□□□□□ -1.47
MSH5-217ENST00000494458 TRIM16LQ309B1 348 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 PLA1AQ53H76 456 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 FAM76BQ5HYJ3 339 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 CLVS2Q5SYC1 327 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 RAB12Q6IQ22 244 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 ZNF585AQ6P3V2 769 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 NRARPQ7Z6K4 114 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 ANGPTL5Q86XS5 388 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 C1orf174Q8IYL3 243 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 GCNT2Q8N0V5 402 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 OR8H2Q8N162 312 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 UBE2J2Q8N2K1 259 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 POC5Q8NA72 575 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 PXT1Q8NFP0 134 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 OR13C9Q8NGT0 318 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 OR2AE1Q8NHA4 323 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 KCNG3Q8TAE7 436 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 GPX8Q8TED1 209 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 AQP3Q92482 292 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 RFT1Q96AA3 541 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 PPP1R14BQ96C90 147 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 FAM71F1Q96KD3 344 aaPredicted RBP5.86□□□□□ -1.47
MSH5-217ENST00000494458 C7orf50Q9BRJ6 194 aaKnown RBP5.86□□□□□ -1.47
MSH5-217ENST00000494458 TM2D1Q9BX74 207 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 TP63Q9H3D4 680 aaPredicted RBP5.86□□□□□ -1.47
MSH5-217ENST00000494458 RNF121Q9H920 327 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 SCPEP1Q9HB40 452 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 DIABLOQ9NR28 239 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 IL36GQ9NZH8 169 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 MTFP1Q9UDX5 166 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 ZNF629Q9UEG4 869 aaPredicted RBP5.86□□□□□ -1.47
MSH5-217ENST00000494458 CGGBP1Q9UFW8 167 aaPredicted RBP5.86□□□□□ -1.47
MSH5-217ENST00000494458 ANAPC10Q9UM13 185 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 STARD10Q9Y365 291 aa5.86□□□□□ -1.47
MSH5-217ENST00000494458 SLC25A15Q9Y619 301 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms