RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ANKRD9Q96BM1 317 aaPredicted RBP10.38□□□□□ -0.75
HDAC4-210ENST00000493582 TM4SF19Q96DZ7 209 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 BCO1Q9HAY6 547 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 A0A0A6YYD4 124 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 RAD51DO75771 328 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 PTBP3O95758 552 aaKnown RBP10.38□□□□□ -0.75
HDAC4-210ENST00000493582 CTLA4P16410 223 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 NUTF2P61970 127 aaKnown RBP10.38□□□□□ -0.75
HDAC4-210ENST00000493582 ROM1Q03395 351 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 LBHQ53QV2 105 aaPredicted RBP10.38□□□□□ -0.75
HDAC4-210ENST00000493582 GGNBP1Q5YKI7 109 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 MAMDC2Q7Z304 686 aaPredicted RBP10.38□□□□□ -0.75
HDAC4-210ENST00000493582 C5orf24Q7Z6I8 188 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 LRRC3BQ96PB8 259 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 CUTCQ9NTM9 273 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 HCKP08631 526 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 FPR2P25090 351 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 RANBP2P49792 3224 aaKnown RBP10.38□□□□□ -0.75
HDAC4-210ENST00000493582 ASCL1P50553 236 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 DMRTC1Q5HYR2 192 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 EMC4Q5J8M3 183 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 ZNF664Q8N3J9 261 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 OR5H2Q8NGV7 314 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 BANF2Q9H503 90 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 PRODH2Q9UF12 536 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 OR52A1Q9UKL2 312 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 TMED3Q9Y3Q3 217 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 TMEM269A0A1B0GVZ9 245 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 A0A1W2PP11 408 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 SEC11BP0C7V7 166 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 PVRP15151 417 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 GJA4P35212 333 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 PPM1AP35813 382 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 DHPSP49366 369 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-210ENST00000493582 DLK1P80370 383 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 INSM1Q01101 510 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-210ENST00000493582 SP3Q02447 781 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 ZNF77Q15935 545 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 WBP2NLQ6ICG8 309 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 Q7L0L9 218 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 PEG10Q86TG7 708 aaKnown RBP10.37□□□□□ -0.75
HDAC4-210ENST00000493582 LINC00346Q8IVM7 164 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 KREMEN2Q8NCW0 462 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 VSTM2LQ96N03 204 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 HIST1H2BLQ99880 126 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 G6PC2Q9NQR9 355 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 SPACA6W5XKT8 324 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 SZT2Q5T011 3432 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 A0A087WZY1 265 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 EDDM13A0A1B0GTR0 161 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 SMCO3A2RU48 225 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 EREGO14944 169 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 XRCC2O43543 280 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 MPIG6BO95866 241 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 APLNRP35414 380 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 APOBEC1P41238 236 aaKnown RBP10.37□□□□□ -0.75
HDAC4-210ENST00000493582 OR3A2P47893 321 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 ZNF157P51786 506 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-210ENST00000493582 BTG2P78543 158 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 VAX1Q5SQQ9 334 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 HIST2H3PS2Q5TEC6 136 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 PLXDC2Q6UX71 529 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 CHRDL2Q6WN34 429 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 TMEM182Q6ZP80 229 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-210ENST00000493582 FAM160A2Q8N612 972 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-210ENST00000493582 NKAIN3Q8N8D7 197 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 OR10G6Q8NH81 332 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 METTL21AQ8WXB1 218 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 RSC1A1Q92681 617 aa10.37□□□□□ -0.75
HDAC4-210ENST00000493582 CEACAM18A8MTB9 384 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 SOX15O60248 233 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 NSA2O95478 260 aaKnown RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 CEACAM5P06731 702 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 GIMD1P0DJR0 217 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 PAX1P15863 534 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 AMY2BP19961 511 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 PTGER4P35408 488 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 RGS19P49795 217 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 BCORP1Q8N888 145 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 LIPHQ8WWY8 451 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 ADAT3Q96EY9 351 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 LMF2Q9BU23 707 aaKnown RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 ABHD14AQ9BUJ0 271 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 ELOA3CA0A087WX78 387 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 PRSS37A4D1T9 235 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 H0YGG7 62 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 DIRAS3O95661 229 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 CT45A8P0DMV1 189 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 CT45A9P0DMV2 189 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 PNMTP11086 282 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 ADH5P11766 374 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 ZNF10P21506 573 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 TMEM50BP56557 158 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 ARF3P61204 181 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-210ENST00000493582 FOXO1Q12778 655 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 ARFRP1Q13795 201 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 ACKR1Q16570 336 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 CT45A2Q5DJT8 189 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 TCEAL6Q6IPX3 200 aa10.36□□□□□ -0.75
HDAC4-210ENST00000493582 FNDC9Q8TBE3 224 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms