RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 MED21Q13503 144 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 OR8B8Q15620 311 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 SNCBQ16143 134 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 SPRNQ5BIV9 151 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 WDR38Q5JTN6 314 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 LAIR2Q6ISS4 152 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 KCTD20Q7Z5Y7 419 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 ELMOD2Q8IZ81 293 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 ZNF786Q8N393 782 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 FTMTQ8N4E7 242 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 CSNK2A3Q8NEV1 391 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 C10orf105Q8TEF2 133 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 YIPF5Q969M3 257 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 TMEM80Q96HE8 168 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 OR2V2Q96R30 315 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 ZNF184Q99676 751 aaPredicted RBP9.82□□□□□ -0.84
CTSA-209ENST00000493522 SOX7Q9BT81 388 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 JAM3Q9BX67 310 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 SLC22A4Q9H015 551 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 MRPL15Q9P015 296 aaKnown RBP9.82□□□□□ -0.84
CTSA-209ENST00000493522 RAB26Q9ULW5 256 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 DIMT1Q9UNQ2 313 aaKnown RBP9.82□□□□□ -0.84
CTSA-209ENST00000493522 SLC22A13Q9Y226 551 aa9.82□□□□□ -0.84
CTSA-209ENST00000493522 EXOSC1Q9Y3B2 195 aaKnown RBP9.82□□□□□ -0.84
CTSA-209ENST00000493522 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.81□□□□□ -0.84
CTSA-209ENST00000493522 IGHV3-64DA0A0J9YX35 117 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 A0A1B0GVI7 797 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 H3BSH0 61 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 NDUFS8O00217 210 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 LIMS3P0CW19 117 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 LIMS4P0CW20 117 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 SLC25A16P16260 332 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 TNFRSF1AP19438 455 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 ACHEP22303 614 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 COL8A2P25067 703 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 ACKR3P25106 362 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 KIR3DL2P43630 455 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 MAP2K3P46734 347 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 SRP9P49458 86 aaKnown RBP9.81□□□□□ -0.84
CTSA-209ENST00000493522 ETV1P50549 477 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 ST3GAL4Q11206 333 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 HFEQ30201 348 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 SYS1Q8N2H4 156 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 PRSS35Q8N3Z0 413 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 STX19Q8N4C7 294 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 KLHL36Q8N4N3 616 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 ZNF540Q8NDQ6 660 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 OR2G2Q8NGZ5 317 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 OR8S1Q8NH09 359 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 GGHQ92820 318 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 PELI1Q96FA3 418 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 MEGF10Q96KG7 1140 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 Q9H521 79 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 ISG20L2Q9H9L3 353 aaKnown RBP9.81□□□□□ -0.84
CTSA-209ENST00000493522 CHODLQ9H9P2 273 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 ZNF275Q9NSD4 429 aaPredicted RBP9.81□□□□□ -0.84
CTSA-209ENST00000493522 PLCXD1Q9NUJ7 323 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 CHCHD3Q9NX63 227 aaKnown RBP9.81□□□□□ -0.84
CTSA-209ENST00000493522 SCN3BQ9NY72 215 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 TREM2Q9NZC2 230 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 CNOT2Q9NZN8 540 aaKnown RBP9.81□□□□□ -0.84
CTSA-209ENST00000493522 IL19Q9UHD0 177 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 PSORS1C1Q9UIG5 152 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 CACNG2Q9Y698 323 aa9.81□□□□□ -0.84
CTSA-209ENST00000493522 ZNF816-ZNF321PA0A0X1KG74 233 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 LOC107986453A0A1B0GWG9 222 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 ANXA2P2A6NMY6 339 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 CLDN25C9JDP6 229 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 MYL12BO14950 172 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 PPIHO43447 177 aaKnown RBP9.8□□□□□ -0.84
CTSA-209ENST00000493522 MTRF1O75570 445 aaKnown RBP9.8□□□□□ -0.84
CTSA-209ENST00000493522 RP2O75695 350 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 DHRS3O75911 302 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 IGLV3-1P01715 115 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 UBCP0CG48 685 aaKnown RBP9.8□□□□□ -0.84
CTSA-209ENST00000493522 FAHP16930 419 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 CRYBB2P43320 205 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 GPR6P46095 362 aaPredicted RBP9.8□□□□□ -0.84
CTSA-209ENST00000493522 MRPS11P82912 194 aaKnown RBP9.8□□□□□ -0.84
CTSA-209ENST00000493522 PRDX4Q13162 271 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 TMEM249Q2WGJ8 235 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 C6orf141Q5SZD1 244 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 OR2G6Q5TZ20 316 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 PRAMEF6Q5VXH4 476 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 TMPRSS11AQ6ZMR5 421 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 DOK3Q7L591 496 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 SEMA6DQ8NFY4 1073 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 ZNF649Q9BS31 505 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 BEX2Q9BXY8 128 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 BPESC1Q9GZL8 116 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 PLEKHA1Q9HB21 404 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 LPAR3Q9UBY5 353 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 PIGLQ9Y2B2 252 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 CAB39Q9Y376 341 aaPredicted RBP9.8□□□□□ -0.84
CTSA-209ENST00000493522 RHBDD3Q9Y3P4 386 aa9.8□□□□□ -0.84
CTSA-209ENST00000493522 A0A1B0GTI1 187 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 A0A1B0GWJ7 208 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 A6NLC8 198 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 ZNF850A8MQ14 1090 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 SYT7O43581 403 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms