RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 ATP5J2P56134 94 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 TNK1Q13470 666 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 RIN1Q13671 783 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 EIF2B1Q14232 305 aaKnown RBP5.71□□□□□ -1.5
VPS52-219ENST00000493379 GK2Q14410 553 aaPredicted RBP5.71□□□□□ -1.5
VPS52-219ENST00000493379 MAD2L1BPQ15013 274 aaPredicted RBP5.71□□□□□ -1.5
VPS52-219ENST00000493379 PCGF3Q3KNV8 242 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 TMEM200BQ69YZ2 307 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 LAIR2Q6ISS4 152 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 Q6ZR03 302 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 ZNF786Q8N393 782 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 DHRSXQ8N5I4 330 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 OR8G5Q8NG78 346 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 OR6N2Q8NGY6 317 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 FAM81AQ8TBF8 368 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 APH1BQ8WW43 257 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 SGK3Q96BR1 496 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 CMBLQ96DG6 245 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 Q96MT0 163 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 SORCS2Q96PQ0 1159 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 CNN2Q99439 309 aaKnown RBP5.71□□□□□ -1.5
VPS52-219ENST00000493379 SLC30A2Q9BRI3 323 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 RAB1BQ9H0U4 201 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 RGCCQ9H4X1 137 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 OPA3Q9H6K4 179 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 PLCXD1Q9NUJ7 323 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 FAM206AQ9NX38 181 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 TAAR3PQ9P1P4 343 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 ZNF319Q9P2F9 582 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 PURGQ9UJV8 347 aaKnown RBP5.71□□□□□ -1.5
VPS52-219ENST00000493379 KLHDC2Q9Y2U9 406 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 PCDHGB1Q9Y5G3 927 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 A0A1W2PQL4 384 aaPredicted RBP5.7□□□□□ -1.5
VPS52-219ENST00000493379 C5orf63A6NC05 138 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 ERICH4A6NGS2 130 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 SNTNA6NMZ2 147 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 M0R129 80 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 M0R233 179 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 XRCC2O43543 280 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 RP2O75695 350 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 KNG1P01042 644 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 IGHV1-46P01743 117 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 ADRA2AP08913 450 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 ATP6V1B1P15313 513 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 SELEP16581 610 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 CFL1P23528 166 aaKnown RBP5.7□□□□□ -1.5
VPS52-219ENST00000493379 GCH1P30793 250 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 CAPGP40121 348 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 CRYBB2P43320 205 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 HCCSP53701 268 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 TMEM33P57088 247 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 CXCR4P61073 352 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 CSNK2BP67870 215 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 FAM3AP98173 230 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 ZNF85Q03923 595 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 ZNF92Q03936 586 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 CD69Q07108 199 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 RAB40BQ12829 278 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 OR8B8Q15620 311 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 SNAI3Q3KNW1 292 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 ALKBH6Q3KRA9 238 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 CDONQ4KMG0 1287 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 ZMAT1Q5H9K5 638 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 FAM76BQ5HYJ3 339 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 TMEM154Q6P9G4 183 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 KLBQ86Z14 1044 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 SLC35F2Q8IXU6 374 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 GALNT4Q8N4A0 578 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 C10orf105Q8TEF2 133 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 THEM6Q8WUY1 208 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 FAM168AQ92567 244 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 APOL4Q9BPW4 351 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 COPS4Q9BT78 406 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 MROQ9BYG7 248 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 SLC22A4Q9H015 551 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 FGF20Q9NP95 211 aaPredicted RBP5.7□□□□□ -1.5
VPS52-219ENST00000493379 G6PC2Q9NQR9 355 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 INPP5EQ9NRR6 644 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 CENPMQ9NSP4 180 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 IMPAD1Q9NX62 359 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 IL19Q9UHD0 177 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 NUFIP1Q9UHK0 495 aaKnown RBP5.7□□□□□ -1.5
VPS52-219ENST00000493379 MRM2Q9UI43 246 aaKnown RBP5.7□□□□□ -1.5
VPS52-219ENST00000493379 LAMP5Q9UJQ1 280 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 RPL36Q9Y3U8 105 aaKnown RBP5.7□□□□□ -1.5
VPS52-219ENST00000493379 LRP12Q9Y561 859 aa5.7□□□□□ -1.5
VPS52-219ENST00000493379 hCG_38984A0A1B0GV85 526 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 SCO2A0A1W2PP80 73 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 METTL15A6NJ78 407 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ZSCAN5BA6NJL1 495 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 DHRS7CA6NNS2 312 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 CD300LBA8K4G0 201 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ZNF670-ZNF695F2Z2N8 137 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 GMDSO60547 372 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 ATP6V1G2O95670 118 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 LY86O95711 162 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 PNPP00491 289 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 MT-ND5P03915 603 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 LCATP04180 440 aa5.69□□□□□ -1.5
VPS52-219ENST00000493379 TACSTD2P09758 323 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms