RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CCDC54Q8NEL0 328 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 SEMA6DQ8NFY4 1073 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 OR51A4Q8NGJ6 313 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 OR13F1Q8NGS4 319 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 SYNPRQ8TBG9 265 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 IGFBPL1Q8WX77 278 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 RGP1Q92546 391 aaPredicted RBP11.49□□□□□ -0.57
MSH6-208ENST00000493177 SPSB4Q96A44 273 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 MARS2Q96GW9 593 aaKnown RBP11.49□□□□□ -0.57
MSH6-208ENST00000493177 COX4I2Q96KJ9 171 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 EXOSC4Q9NPD3 245 aaKnown RBP11.49□□□□□ -0.57
MSH6-208ENST00000493177 PMF1-BGLAPU3KQ54 211 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 CADP27708 2225 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 A0A1W2PPW3 197 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 A6NIN4 97 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 H3BSA7 217 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 OVOL3O00110 214 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 TIMM8AO60220 97 aaPredicted RBP11.48□□□□□ -0.57
MSH6-208ENST00000493177 SSX4O60224 188 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 DHRS3O75911 302 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 IGLV3-1P01715 115 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 HLA-DPB1P04440 258 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 RAC2P15153 192 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 CCL1P22362 96 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 TGFBR2P37173 567 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 MAGEB1P43366 347 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 MAP2K3P46734 347 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 RIPPLY1Q0D2K3 151 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 Q499Y3 187 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 ACSM3Q53FZ2 586 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 MBNL2Q5VZF2 373 aaKnown RBP11.48□□□□□ -0.57
MSH6-208ENST00000493177 SATL1Q86VE3 508 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 CIARTQ8N365 385 aaPredicted RBP11.48□□□□□ -0.57
MSH6-208ENST00000493177 BHLHE23Q8NDY6 225 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 OR56B2PQ8NGI1 322 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 OR14K1Q8NGZ2 314 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 YIPF6Q96EC8 236 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 OR14A2Q96R54 314 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 SYT3Q9BQG1 590 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 REPIN1Q9BWE0 567 aaKnown RBP11.48□□□□□ -0.57
MSH6-208ENST00000493177 ZNF442Q9H7R0 627 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 STUB1Q9UNE7 303 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 PIGLQ9Y2B2 252 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 SF3B6Q9Y3B4 125 aaKnown RBP11.48□□□□□ -0.57
MSH6-208ENST00000493177 ROS1P08922 2347 aa11.48□□□□□ -0.57
MSH6-208ENST00000493177 USF3Q68DE3 2245 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 LOC100506127A0A0U1RQW1 187 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 A0A1W2PPK0 400 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 CD300LBA8K4G0 201 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 ZNF879B4DU55 563 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 GABRPO00591 440 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 LMX1BO60663 402 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 CD8AP01732 235 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 IGHV4-39P01824 125 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 CD2P06729 351 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 HEXAP06865 529 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 OR4A8P0C604 315 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 GADD45AP24522 165 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 GNALP38405 381 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 KLF3P57682 345 aaPredicted RBP11.47□□□□□ -0.57
MSH6-208ENST00000493177 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
MSH6-208ENST00000493177 SNRPD2P62316 118 aaKnown RBP11.47□□□□□ -0.57
MSH6-208ENST00000493177 FABP5Q01469 135 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 PSG7Q13046 419 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 TNK1Q13470 666 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 BLMHQ13867 455 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 INSL4Q14641 139 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 MSMPQ1L6U9 139 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 ALKBH6Q3KRA9 238 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 GPR107Q5VW38 600 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 CEACAM19Q7Z692 300 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 LRP11Q86VZ4 500 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 CLVS1Q8IUQ0 354 aaPredicted RBP11.47□□□□□ -0.57
MSH6-208ENST00000493177 PLPP7Q8NBV4 271 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 MRPL24Q96A35 216 aaKnown RBP11.47□□□□□ -0.57
MSH6-208ENST00000493177 FGGYQ96C11 551 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 HAVCR1Q96D42 359 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 CHCHD6Q9BRQ6 235 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 FUNDC2Q9BWH2 189 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 MRPL37Q9BZE1 423 aaKnown RBP11.47□□□□□ -0.57
MSH6-208ENST00000493177 OR51E2Q9H255 320 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 PLK3Q9H4B4 646 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 ZNF275Q9NSD4 429 aaPredicted RBP11.47□□□□□ -0.57
MSH6-208ENST00000493177 ENPP5Q9UJA9 477 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 PURGQ9UJV8 347 aaKnown RBP11.47□□□□□ -0.57
MSH6-208ENST00000493177 SSR3Q9UNL2 185 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 V9GYS6 101 aa11.47□□□□□ -0.57
MSH6-208ENST00000493177 TRBV5-5A0A0J9YX44 114 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 LOC390937A0A1W2PQ73 354 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 ANKRD30BLA7E2S9 258 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 RNF223E7ERA6 249 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 AIREO43918 545 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 NDUFS7O75251 213 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 LY6G6DO95868 133 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 ZNF250P15622 560 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 FAHP16930 419 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 ACKR3P25106 362 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 MAPK3P27361 379 aaPredicted RBP11.46□□□□□ -0.57
MSH6-208ENST00000493177 DDOSTP39656 456 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 OR8B8Q15620 311 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms