RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 SNTB1Q13884 538 aaKnown RBP6.19□□□□□ -1.42
HERC4-211ENST00000492996 OPCMLQ14982 345 aa6.19□□□□□ -1.42
HERC4-211ENST00000492996 TMEM156Q8N614 296 aa6.19□□□□□ -1.42
HERC4-211ENST00000492996 OR52B4Q8NGK2 314 aa6.19□□□□□ -1.42
HERC4-211ENST00000492996 FER1L6-AS2Q96M78 137 aa6.19□□□□□ -1.42
HERC4-211ENST00000492996 C7orf50Q9BRJ6 194 aaKnown RBP6.19□□□□□ -1.42
HERC4-211ENST00000492996 METTL17Q9H7H0 456 aaPredicted RBP6.19□□□□□ -1.42
HERC4-211ENST00000492996 G6PC2Q9NQR9 355 aa6.19□□□□□ -1.42
HERC4-211ENST00000492996 NCKAP5O14513 1909 aa6.19□□□□□ -1.42
HERC4-211ENST00000492996 TMEM272A0A1B0GTI8 110 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ZNF208O43345 1280 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 CSN2P05814 226 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 UMODP07911 640 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ZNF43P17038 809 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 HTR2CP28335 458 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 MNDAP41218 407 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 RAB5BP61020 215 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 UBE2MP61081 183 aaKnown RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 OC90Q02509 493 aaPredicted RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 ZP4Q12836 540 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 CLINT1Q14677 625 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 TAF13Q15543 124 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 GLT8D1Q68CQ7 371 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 FDX2Q6P4F2 183 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ANKRD16Q6P6B7 361 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 KLHL24Q6TFL4 600 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 SPAG16Q8N0X2 631 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 RBMXL3Q8N7X1 1067 aaKnown RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 BOLLQ8N9W6 283 aaKnown RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 OR4C16Q8NGL9 310 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 CT55Q8WUE5 264 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 EDARADDQ8WWZ3 215 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 SOX7Q9BT81 388 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 PTGES2Q9H7Z7 377 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ZNF160Q9HCG1 818 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ZNF69Q9UC07 566 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 CACNA1HO95180 2353 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 LOC100289279A0A1B0GTE1 492 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 A0A1B0GUH1 482 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ZNF729A6NN14 1252 aaPredicted RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 C9J4A7 227 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 SMAD9O15198 467 aaKnown RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 RER1O15258 196 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 VAMP1P23763 118 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 MSX1P28360 303 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 PTGFRP43088 359 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 AVPI1Q5T686 147 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 RAET1LQ5VY80 246 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 CD276Q5ZPR3 534 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 PDZD9Q8IXQ8 264 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 BVESQ8NE79 360 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 OR10S1Q8NGN2 331 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 OR13C9Q8NGT0 318 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 DTD1Q8TEA8 209 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 WDR89Q96FK6 387 aaPredicted RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 IMMP1LQ96LU5 166 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 MRI1Q9BV20 369 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 POTEKPQ9BYX7 375 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ZFP64Q9NPA5 681 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 TAS2R3Q9NYW6 316 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 HS3ST3B1Q9Y662 390 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 CHCHD2Q9Y6H1 151 aaPredicted RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 A0A1B0GW55 424 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ZNF726A6NNF4 738 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 PYCARD-AS1I3L0S3 204 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 TP53I11O14683 189 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 TRAF3IP2O43734 574 aaPredicted RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 STK17BO94768 372 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 CD3DP04234 171 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 DUX4L2P0CJ85 424 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 DUX4L3P0CJ86 424 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 DUX4L4P0CJ87 422 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 DUX4L5P0CJ88 424 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 DUX4L6P0CJ89 424 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 DUX4L7P0CJ90 424 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ANOS1P23352 680 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 LAP3P28838 519 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 OTX2P32243 289 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 PRSS3P35030 304 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 CLDN17P56750 224 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ZP1P60852 638 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 MOGAT2Q3SYC2 334 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ACER2Q5QJU3 275 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ZNF468Q5VIY5 522 aaPredicted RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 FGD2Q7Z6J4 655 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 CBLN2Q8IUK8 224 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 MEIOBQ8N635 442 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 OR4D6Q8NGJ1 314 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 OR51S1Q8NGJ8 323 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 OR51E1Q8TCB6 317 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 ELP5Q8TE02 316 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 CMBLQ96DG6 245 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 PLEKHA1Q9HB21 404 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 DUX4Q9UBX2 424 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 GPR160Q9UJ42 338 aa6.18□□□□□ -1.42
HERC4-211ENST00000492996 GDF2Q9UK05 429 aaPredicted RBP6.18□□□□□ -1.42
HERC4-211ENST00000492996 DNAJC13O75165 2243 aa6.17□□□□□ -1.42
HERC4-211ENST00000492996 LOC100509620A0A075B734 347 aa6.17□□□□□ -1.42
HERC4-211ENST00000492996 HSPB2A8KAH6 182 aa6.17□□□□□ -1.42
HERC4-211ENST00000492996 C1orf196B1AJZ1 125 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms