RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 OR56B4Q8NH76 319 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 OR2AE1Q8NHA4 323 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 SNIP1Q8TAD8 396 aaKnown RBP12.22□□□□□ -0.45
PTPN7-216ENST00000492977 ITFG2Q969R8 447 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 SPSB4Q96A44 273 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 SEH1LQ96EE3 360 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 C1orf147Q96MC9 270 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-216ENST00000492977 C12orf49Q9H741 205 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 B3GNT2Q9NY97 397 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 PRSS50Q9UI38 385 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 ZNF107Q9UII5 783 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-216ENST00000492977 ZNF221Q9UK13 617 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 TNRC6AQ8NDV7 1962 aaKnown RBP12.21□□□□□ -0.46
PTPN7-216ENST00000492977 TRAV6A0A075B6T7 132 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 HLA-HP01893 362 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 MELTFP08582 738 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 H2AFB2P0C5Z0 115 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 NAT2P11245 290 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 PRKACBP22694 351 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 ACKR3P25106 362 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 PTGFRP43088 359 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 MOGAT2Q3SYC2 334 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 TBRG1Q3YBR2 411 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 ZNF260Q3ZCT1 412 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 RNF144BQ7Z419 303 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 ACBD4Q8NC06 268 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 OR1K1Q8NGR3 316 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 AQP3Q92482 292 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 SPSB1Q96BD6 273 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 CPNE2Q96FN4 548 aaPredicted RBP12.21□□□□□ -0.46
PTPN7-216ENST00000492977 ST6GAL2Q96JF0 529 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 GAL3ST1Q99999 423 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 KLK13Q9UKR3 277 aa12.21□□□□□ -0.46
PTPN7-216ENST00000492977 LOC100509620A0A075B734 347 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 hCG_38984A0A1B0GV85 526 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 C7orf66A4D0T2 115 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 IL18BPO95998 194 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 CD79AP11912 226 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 EIF2S3P41091 472 aaKnown RBP12.2□□□□□ -0.46
PTPN7-216ENST00000492977 RAB25P57735 213 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 RAB1AP62820 205 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 FAM3AP98173 230 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 ZNF92Q03936 586 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 PLP2Q04941 152 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 TNK1Q13470 666 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 OR8B8Q15620 311 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 TMEM255AQ5JRV8 349 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 CLVS2Q5SYC1 327 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 ZBTB37Q5TC79 503 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 TMEM42Q69YG0 159 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 SFRP4Q6FHJ7 346 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-216ENST00000492977 Q6ZS92 163 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 OR10R2Q8NGX6 335 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 NANOS1Q8WY41 292 aaKnown RBP12.2□□□□□ -0.46
PTPN7-216ENST00000492977 BCL2L2Q92843 193 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-216ENST00000492977 TRIB1Q96RU8 372 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 CST11Q9H112 138 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 MCUBQ9NWR8 336 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 MED12LQ86YW9 2145 aa12.2□□□□□ -0.46
PTPN7-216ENST00000492977 OR14I1A6ND48 311 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 AHRRA9YTQ3 701 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 CDC14BO60729 498 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 AKAIN1P0CW23 69 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 EDN3P14138 238 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 STOMP27105 288 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 TAS2R19P59542 299 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 RRAS2P62070 204 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-216ENST00000492977 CNN3Q15417 329 aaKnown RBP12.19□□□□□ -0.46
PTPN7-216ENST00000492977 RSPO4Q2I0M5 234 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-216ENST00000492977 CDNFQ49AH0 187 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 ATAD3CQ5T2N8 411 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 CRIP3Q6Q6R5 217 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 FAM214BQ7L5A3 538 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 TMEM229BQ8NBD8 167 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 TECTBQ96PL2 329 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 URM1Q9BTM9 101 aaKnown RBP12.19□□□□□ -0.46
PTPN7-216ENST00000492977 TMEM59Q9BXS4 323 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 LPAR5Q9H1C0 372 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 C20orf85Q9H1P6 137 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 CEP250Q9BV73 2442 aa12.19□□□□□ -0.46
PTPN7-216ENST00000492977 A0A0A6YYJ9 748 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 C5orf49A4QMS7 147 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 WISP2O76076 250 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 CNOT4O95628 575 aaKnown RBP12.18□□□□□ -0.46
PTPN7-216ENST00000492977 MPIG6BO95866 241 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 NRASP01111 189 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 SERPINA5P05154 406 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 GTF2F2P13984 249 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 VEGFCP49767 419 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 TGFBR3Q03167 851 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 GUSBP1Q15486 140 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 GSG1Q2KHT4 349 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 Q6ZTK2 550 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 CCDC36Q8IYA8 594 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 CHST4Q8NCG5 386 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 TMEM104Q8NE00 496 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 NPRL2Q8WTW4 380 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 TNFAIP8L1Q8WVP5 186 aa12.18□□□□□ -0.46
PTPN7-216ENST00000492977 APOBEC3DQ96AK3 386 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-216ENST00000492977 POM121L2Q96KW2 1035 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms