RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 INPP1P49441 399 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 COLCA1Q6ZS62 124 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 NOXA1Q86UR1 476 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 STEAP2Q8NFT2 490 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 UBASH3BQ8TF42 649 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 S100PBPQ96BU1 408 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 RGCCQ9H4X1 137 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 RANGRFQ9HD47 186 aaPredicted RBP12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 CKLFQ9UBR5 152 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 ALG5Q9Y673 324 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 MTRF1O75570 445 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 CELA3BP08861 270 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 RAB3BP20337 219 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 FAM27E3Q08E93 113 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 TATDN3Q17R31 274 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 C1QTNF12Q5T7M4 302 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 GLCCI1Q86VQ1 547 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 FJX1Q86VR8 437 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 TCTE3Q8IZS6 198 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 PLPP7Q8NBV4 271 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 GALNT11Q8NCW6 608 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 CCDC54Q8NEL0 328 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 OR1J2Q8NGS2 313 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 APOBEC3DQ96AK3 386 aaPredicted RBP12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 SGK3Q96BR1 496 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 LYZL4Q96KX0 146 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 MARVELD1Q9BSK0 173 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 PLEKHA1Q9HB21 404 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 SLC25A15Q9Y619 301 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 TRAV8-7A0A075B6U6 113 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 A0A0G2JK05 382 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 A0A0G2JMP0 313 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 A0A0X1KG70 313 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 ANKRD61A6NGH8 418 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 PDCD5O14737 125 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 XRCC2O43543 280 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 LMX1BO60663 402 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 DHRS3O75911 302 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 AGFG2O95081 481 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 FSTP19883 344 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 CHRNB4P30926 498 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 SFXN4Q6P4A7 337 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 MYPOPQ86VE0 399 aaPredicted RBP12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 FAM169BQ8N8A8 192 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 ASCC1Q8N9N2 400 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 OR4M2Q8NGB6 313 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 OR4M1Q8NGD0 313 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 OR2AE1Q8NHA4 323 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 PRR7Q8TB68 274 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 FGGYQ96C11 551 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 MUCL1Q96DR8 90 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 REEP6Q96HR9 211 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 FYTTD1Q96QD9 318 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 USB1Q9BQ65 265 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 SOX7Q9BT81 388 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 C1QTNF6Q9BXI9 259 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 ACTR6Q9GZN1 396 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 CDH20Q9HBT6 801 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 COQ3Q9NZJ6 369 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 NLKQ9UBE8 527 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 FOXJ3Q9UPW0 622 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
PDZRN3-210ENST00000492909 LOC390937A0A1W2PQ73 354 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 C16orf97H3BN30 126 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 ORC5O43913 435 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 EIF4EP06730 217 aaKnown RBP12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 ZNF20P17024 532 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 TALDO1P37837 337 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 OR10A3P58181 314 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 GLYATL3Q5SZD4 288 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 ZNF57Q68EA5 555 aaPredicted RBP12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 Q6ZSR3 168 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 UTS2BQ765I0 119 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 SERPINA12Q8IW75 414 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 OR14K1Q8NGZ2 314 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 AKAP1Q92667 903 aaKnown RBP eCLIP12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 UPRTQ96BW1 309 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 ADAT3Q96EY9 351 aaPredicted RBP12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 AK6Q9Y3D8 172 aaKnown RBP12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 V9GYS6 101 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 A0A1B0GUH1 482 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 IGLV1-44P01699 117 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 MAS1P04201 325 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 GNALP38405 381 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 CD83Q01151 205 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 MALLQ13021 153 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 PPA1Q15181 289 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 SLC25A35Q3KQZ1 300 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 CEP78Q5JTW2 689 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 HACD4Q5VWC8 232 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 ASPHD2Q6ICH7 369 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 ZNF101Q8IZC7 436 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 PAQR4Q8N4S7 273 aaPredicted RBP12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 OR5D14Q8NGL3 314 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 SPSB4Q96A44 273 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 RFT1Q96AA3 541 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 HEATR1Q9H583 2144 aaKnown RBP12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 SLA2Q9H6Q3 261 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 TAS2R4Q9NYW5 299 aa12.18□□□□□ -0.46
PDZRN3-210ENST00000492909 EIF3KQ9UBQ5 218 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms