RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 HTR1AP08908 422 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 IRF2P14316 349 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 MYL12AP19105 171 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 HSPA13P48723 471 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 PRDX4Q13162 271 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 MED21Q13503 144 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 TMEM249Q2WGJ8 235 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 WDR38Q5JTN6 314 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 PRAMEF6Q5VXH4 476 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 DOK3Q7L591 496 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 EGFL6Q8IUX8 553 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 SYS1Q8N2H4 156 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 PRSS35Q8N3Z0 413 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 OR11L1Q8NGX0 322 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 FBLIM1Q8WUP2 373 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 GGHQ92820 318 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 ERGIC1Q969X5 290 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 TMEM80Q96HE8 168 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 MICU1Q9BPX6 476 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 PPP1R3EQ9H7J1 279 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 ISG20L2Q9H9L3 353 aaKnown RBP11.8□□□□□ -0.52
CCM2-217ENST00000492883 FN3KRPQ9HA64 309 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 ABCB9Q9NP78 766 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 DCAF16Q9NXF7 216 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 PIGLQ9Y2B2 252 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 WIPI2Q9Y4P8 454 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 NPTNQ9Y639 398 aa11.8□□□□□ -0.52
CCM2-217ENST00000492883 RTTNQ86VV8 2226 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 LOC100289279A0A1B0GTE1 492 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 A0A1B0GTI1 187 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 EFCAB10A6NFE3 127 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 A6NLC8 198 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 TMEM178BH3BS89 294 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 H3BSH0 61 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 SYT7O43581 403 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 XPNPEP2O43895 674 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 CYB5R3P00387 301 aaPredicted RBP11.79□□□□□ -0.52
CCM2-217ENST00000492883 HEXAP06865 529 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 RBMXP38159 391 aaKnown RBP11.79□□□□□ -0.52
CCM2-217ENST00000492883 VHLP40337 213 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 GATA4P43694 442 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
CCM2-217ENST00000492883 CSNK2BP67870 215 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 ST3GAL4Q11206 333 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 MRPL28Q13084 256 aaKnown RBP11.79□□□□□ -0.52
CCM2-217ENST00000492883 HNRNPA0Q13151 305 aaKnown RBP11.79□□□□□ -0.52
CCM2-217ENST00000492883 MPPED2Q15777 294 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 LAIR2Q6ISS4 152 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 TMPRSS11AQ6ZMR5 421 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 KCTD8Q6ZWB6 473 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 Q71RC1 249 aaPredicted RBP11.79□□□□□ -0.52
CCM2-217ENST00000492883 ZDHHC23Q8IYP9 409 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 STX19Q8N4C7 294 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 PLPP7Q8NBV4 271 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 OR14K1Q8NGZ2 314 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 OR2G2Q8NGZ5 317 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 HPS1Q92902 700 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 PELI1Q96FA3 418 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 RNF170Q96K19 258 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 ZNF649Q9BS31 505 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 JAM3Q9BX67 310 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 PLCXD1Q9NUJ7 323 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 FRRS1LQ9P0K9 344 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 ENPP5Q9UJA9 477 aa11.79□□□□□ -0.52
CCM2-217ENST00000492883 DIMT1Q9UNQ2 313 aaKnown RBP11.79□□□□□ -0.52
CCM2-217ENST00000492883 EXOSC1Q9Y3B2 195 aaKnown RBP11.79□□□□□ -0.52
CCM2-217ENST00000492883 ARFGEF3Q5TH69 2177 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 WNT9BO14905 357 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 RRP9O43818 475 aaKnown RBP11.78□□□□□ -0.52
CCM2-217ENST00000492883 UBCP0CG48 685 aaKnown RBP11.78□□□□□ -0.52
CCM2-217ENST00000492883 LIMS3P0CW19 117 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 LIMS4P0CW20 117 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 FAHP16930 419 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 PMELP40967 661 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 KIR3DL2P43630 455 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 ETV1P50549 477 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 ALKBH1Q13686 389 aaKnown RBP11.78□□□□□ -0.52
CCM2-217ENST00000492883 ZNF181Q2M3W8 571 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 C6orf141Q5SZD1 244 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 ZBTB37Q5TC79 503 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 TMEM244Q5VVB8 128 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 CYB5R2Q6BCY4 276 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 FDX2Q6P4F2 183 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 MOB3CQ70IA8 216 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 AHSA2Q719I0 299 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 RDH10Q8IZV5 341 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 C1orf87Q8N0U7 546 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 KLHL36Q8N4N3 616 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 CCDC54Q8NEL0 328 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 CLDND2Q8NHS1 167 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 OR5P3Q8WZ94 311 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 RTL8AQ9BWD3 113 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 PLEKHA1Q9HB21 404 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 SCN3BQ9NY72 215 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 CNOT2Q9NZN8 540 aaKnown RBP11.78□□□□□ -0.52
CCM2-217ENST00000492883 PSORS1C1Q9UIG5 152 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 CAB39Q9Y376 341 aaPredicted RBP11.78□□□□□ -0.52
CCM2-217ENST00000492883 V9GYS6 101 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 OTOGQ6ZRI0 2925 aa11.78□□□□□ -0.52
CCM2-217ENST00000492883 MYO9AB2RTY4 2548 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms