RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ADOQ96SZ5 270 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 EFCAB11Q9BUY7 163 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF665Q9H7R5 613 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 POLD4Q9HCU8 107 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 HRASLS2Q9NWW9 162 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 FAM30AQ9NZY2 134 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 RAB22AQ9UL26 194 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 AK6Q9Y3D8 172 aaKnown RBP3.64□□□□□ -1.83
BRCA1-220ENST00000492859 FOCADQ5VW36 1801 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 TOP2AP11388 1531 aaKnown RBP3.64□□□□□ -1.83
BRCA1-220ENST00000492859 POLA1P09884 1462 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-220ENST00000492859 TEX14Q8IWB6 1497 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 MTCL1Q9Y4B5 1905 aaKnown RBP3.64□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF816-ZNF321PA0A0X1KG74 233 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 FAM95CA0A1B0GW59 222 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OR4C46A6NHA9 309 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 MFNGO00587 321 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 SH2D1BO14796 132 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 TAAR5O14804 337 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 DEGS1O15121 323 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PPIHO43447 177 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 MBTPS2O43462 519 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ITM2AO43736 263 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 RFPL2O75678 378 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OR7C1O76099 320 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 HLA-DQA2P01906 255 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 C8BP07358 591 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 RFPL3SP0C7P2 107 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 IGFBP3P17936 291 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 RAB3BP20337 219 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 FGF7P21781 194 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 LOXP28300 417 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PFN3P60673 137 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ABCE1P61221 599 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 RPS4XP62701 263 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 HBA1P69905 142 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 MXD1Q05195 221 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PIGFQ07326 219 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 INCA1Q0VD86 236 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF155Q12901 538 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OR1C1Q15619 314 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GUCA2BQ16661 112 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ATP6AP1LQ52LC2 224 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 LDLRAD2Q5SZI1 272 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ARTNQ5T4W7 220 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 HIST2H3PS2Q5TEC6 136 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 SPSB3Q6PJ21 355 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OPN5Q6U736 354 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ADAMTSL5Q6ZMM2 481 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 Q71RC1 249 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 HSD17B13Q7Z5P4 300 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CROCCP2Q86T23 111 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CA13Q8N1Q1 262 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 LINC01561Q8N1V8 128 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 BPIFB2Q8N4F0 458 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CBR4Q8N4T8 237 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 C11orf42Q8N5U0 333 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PNPLA1Q8N8W4 532 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GATD1Q8NB37 220 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 RELL2Q8NC24 303 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 RNF149Q8NC42 400 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 TSTD1Q8NFU3 115 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OR4M1Q8NGD0 313 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OR5B3Q8NH48 314 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OR5R1Q8NH85 324 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CNIH3Q8TBE1 160 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 NDRG1Q92597 394 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 RND1Q92730 232 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF503Q96F45 646 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 SLC35G5Q96KT7 338 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 NEDD4LQ96PU5 975 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 FRG2BQ96QU4 278 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF184Q99676 751 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 RASL11BQ9BPW5 248 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 SULT4A1Q9BR01 284 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 LINC00470Q9BZP3 86 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 MEGF9Q9H1U4 602 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CXXC4Q9H2H0 198 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PRORYQ9H606 182 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ZDHHC11Q9H8X9 412 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ACOT13Q9NPJ3 140 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 MED9Q9NWA0 146 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 IDI2-AS1Q9NZ38 188 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CISD1Q9NZ45 108 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 MED11Q9P086 117 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ARMCX1Q9P291 453 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 TNFSF18Q9UNG2 199 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 HS3ST3B1Q9Y662 390 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 SETD1AO15047 1707 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 FANCAO15360 1455 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ARHGEF11O15085 1522 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM131LA2VDJ0 1609 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 IGHV2-70DA0A0C4DH43 119 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PRAMEF33A0A0G2JMD5 474 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 HMX2A2RU54 273 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 FOXI3A8MTJ6 420 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 TRIM49D1C9J1S8 452 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PRAMEF10O60809 474 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PIAS1O75925 651 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 KLF8O95600 359 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms