RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 IGHMP01871 453 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 PRKAR1AP10644 381 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 PNMTP11086 282 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 GP1BBP13224 206 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 IRF2P14316 349 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 HIST1H1CP16403 213 aaKnown RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 PGCP20142 388 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 CD1BP29016 333 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 IL12BP29460 328 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TNFSF8P32971 234 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TGFBR2P37173 567 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 RPS5P46782 204 aaKnown RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 HSPA13P48723 471 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 PCYT1AP49585 367 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 LHX2P50458 406 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 POLR2HP52434 150 aaKnown RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 ZNF133P52736 654 aaPredicted RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 CLDN18P56856 261 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 HERV-K104P63124 156 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 ERVK-25P63136 954 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 ZNF85Q03923 595 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 EMX1Q04741 257 aaPredicted RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 RPL18Q07020 188 aaKnown RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 CRYZQ08257 329 aaKnown RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 RASGEF1BQ0VAM2 473 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 MAB21L1Q13394 359 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 ETFDHQ16134 617 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 HIST3H3Q16695 136 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 RSPO1Q2MKA7 263 aaPredicted RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 DEFB109BQ30KR1 87 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 MESTQ5EB52 335 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 RBM48Q5RL73 367 aaKnown RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 C1orf140Q5VVS0 124 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 RNLSQ5VYX0 342 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 OTPQ5XKR4 325 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TTC33Q6PID6 262 aaPredicted RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 IGFL3Q6UXB1 125 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 ZNF627Q7L945 461 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 LHFPL4Q7Z7J7 247 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 YRDCQ86U90 279 aaKnown RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 RANBP3LQ86VV4 465 aaPredicted RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 COMMD2Q86X83 199 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 RAB43Q86YS6 212 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 GPALPP1Q8IXQ4 340 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 GPR137CQ8N3F9 429 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 RFLNBQ8N5W9 214 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 COMMD1Q8N668 190 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TMEM251Q8N6I4 163 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 SLC37A3Q8NCC5 494 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 FAM83FQ8NEG4 500 aaPredicted RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 OR52I1Q8NGK6 324 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 MFSD8Q8NHS3 518 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TMEM163Q8TC26 289 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 ASB10Q8WXI3 467 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TM9SF4Q92544 642 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 PHYHIPQ92561 330 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 YIPF6Q96EC8 236 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TSPAN32Q96QS1 320 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 CITED1Q99966 193 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 AIFM2Q9BRQ8 373 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TBL1XR1Q9BZK7 514 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 SLC19A3Q9BZV2 496 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 ING2Q9H160 280 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 Q9H8V8 135 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 MARCH7Q9H992 704 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 MRPL22Q9NWU5 206 aaKnown RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 MRPL39Q9NYK5 338 aaKnown RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TAS2R16Q9NYV7 291 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TVP23BQ9NYZ1 205 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 DNAJC27Q9NZQ0 273 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 ONECUT1Q9UBC0 465 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 SPRR3Q9UBC9 169 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 MRTO4Q9UKD2 239 aaKnown RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 B9D1Q9UPM9 204 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 LAMP3Q9UQV4 416 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 KLHDC2Q9Y2U9 406 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 POLEQ07864 2286 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 CENPEQ02224 2701 aa3.88□□□□□ -1.79
CLIP4-211ENST00000491701 USP9XQ93008 2570 aaPredicted RBP3.88□□□□□ -1.79
CLIP4-211ENST00000491701 TRAV18A0A075B6X5 111 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 TRAV26-1A0A087WT03 109 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 IGLV1-36A0A0B4J1U3 117 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 LOC100506127A0A0U1RQW1 187 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 OR5H15A6NDH6 313 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 PPIAL4DF5H284 164 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 K7ENP7 123 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 TP53I11O14683 189 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 SAP30O75446 220 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 CBR3O75828 277 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 CDK1P06493 297 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 CD14P08571 375 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 GSTM3P21266 225 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 BDKRB2P30411 391 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 SRD5A2P31213 254 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 RFC3P40938 356 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 GLIPR1P48060 266 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 FOXG1P55316 489 aaPredicted RBP3.87□□□□□ -1.79
CLIP4-211ENST00000491701 DSCR4P56555 118 aaPredicted RBP3.87□□□□□ -1.79
CLIP4-211ENST00000491701 NUP107P57740 925 aa3.87□□□□□ -1.79
CLIP4-211ENST00000491701 HPCAP84074 193 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms