RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 FAHD2AQ96GK7 314 aa10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 OR8B4Q96RC9 309 aa10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 ALG8Q9BVK2 526 aa10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 REPIN1Q9BWE0 567 aaKnown RBP10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 METTL17Q9H7H0 456 aaPredicted RBP10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 FGF20Q9NP95 211 aaPredicted RBP10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 TMEM106BQ9NUM4 274 aa10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 ERVK13-1Q9NX77 482 aa10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 UBAP1Q9NZ09 502 aa10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 DIMT1Q9UNQ2 313 aaKnown RBP10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 EXOSC1Q9Y3B2 195 aaKnown RBP10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 LRP12Q9Y561 859 aa10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 PCDHGB5Q9Y5G0 923 aa10.69□□□□□ -0.7
SEC61A1-206ENST00000491668 LOC105371242A0A075B767 164 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 A0A1B0GWJ7 208 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 C5orf63A6NC05 138 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 H0YL77 283 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 J3QLW9 94 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 J3QRE1 110 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 J3QW42 95 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 MAGEB4O15481 346 aaPredicted RBP10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 MLNRO43193 412 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 TBX1O43435 398 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 SULT1C4O75897 302 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 RPP14O95059 124 aaKnown RBP10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 PNPP00491 289 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 IGHA1P01876 353 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 ACSM4P0C7M7 580 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 SLC2A1P11166 492 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 ZNF19P17023 458 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 PCMT1P22061 227 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 CRHBPP24387 322 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 ZNF85Q03923 595 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 MALLQ13021 153 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 GALEQ14376 348 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 ZMYND11Q15326 602 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 TP53I3Q53FA7 332 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 ZMAT1Q5H9K5 638 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 OR2T2Q6IF00 324 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 DRAM2Q6UX65 266 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 SSX6Q7RTT6 188 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 KCTD20Q7Z5Y7 419 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 OR10AD1Q8NGE0 317 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 OR5L1Q8NGL2 311 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 APOBEC3DQ96AK3 386 aaPredicted RBP10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 RAB39BQ96DA2 213 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 TIMD4Q96H15 378 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 C4orf36Q96KX1 117 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 COG8Q96MW5 612 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 OR2V2Q96R30 315 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 GAL3ST1Q99999 423 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 C1QTNF5Q9BXJ0 243 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 OPN4Q9UHM6 478 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 ERGIC3Q9Y282 383 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 LRCH1Q9Y2L9 728 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 NPTNQ9Y639 398 aa10.68□□□□□ -0.7
SEC61A1-206ENST00000491668 TMEM269A0A1B0GVZ9 245 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 ISPDA4D126 451 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 LOC110117498-PIK3R3F6TDL0 507 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 MYL12BO14950 172 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 RGS10O43665 173 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 VENTXO95231 258 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 CDK1P06493 297 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 ETV1P50549 477 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 GBX2P52951 348 aaPredicted RBP10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 ZNF121P58317 390 aaPredicted RBP10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 SEC61A1P61619 476 aaKnown RBP10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 FAM57BQ71RH2 274 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 KLHL36Q8N4N3 616 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 PGAM5Q96HS1 289 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 SLC30A2Q9BRI3 323 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 YTHDF1Q9BYJ9 559 aaKnown RBP10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 GCM1Q9NP62 436 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 ERVK-18Q9QC07 812 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 IL19Q9UHD0 177 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 MRM2Q9UI43 246 aaKnown RBP10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 METRNQ9UJH8 293 aa10.67□□□□□ -0.7
SEC61A1-206ENST00000491668 IGHV3-64DA0A0J9YX35 117 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 IQCF6A8MYZ5 107 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 PRR32B1ATL7 298 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 TCF21O43680 179 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 FSHBP01225 129 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 SELEP16581 610 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 ADRA2CP18825 462 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 C21orf33P30042 268 aaPredicted RBP10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 OTX1P32242 354 aaPredicted RBP10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 DCTDP32321 178 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 PMELP40967 661 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 MMP16P51512 607 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 OR12D2P58182 307 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 PSMA6P60900 246 aaKnown RBP10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 SLC35A2P78381 396 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 LCN2P80188 198 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 SLC3A1Q07837 685 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 GK2Q14410 553 aaPredicted RBP10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 TIGD6Q17RP2 521 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 GFOD2Q3B7J2 385 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 CDONQ4KMG0 1287 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 LIPNQ5VXI9 398 aa10.66□□□□□ -0.7
SEC61A1-206ENST00000491668 LRRC28Q86X40 367 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms