RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 TEX261Q6UWH6 196 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 CERS6Q6ZMG9 384 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 TMED4Q7Z7H5 227 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 TRAPPC5Q8IUR0 188 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 NAXDQ8IW45 347 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 STPG2Q8N412 459 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 CCDC54Q8NEL0 328 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 LFNGQ8NES3 379 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 OR2L2Q8NH16 312 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 PIGXQ8TBF5 258 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 MAFIPQ8WZ33 124 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 NDRG1Q92597 394 aaKnown RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 TAAR8Q969N4 342 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 PTH2Q96A98 100 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SLC25A46Q96AG3 418 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 CREB3L1Q96BA8 519 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SMARCD1Q96GM5 515 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 DIRAS2Q96HU8 199 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 PRAP1Q96NZ9 151 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 GPR21Q99679 349 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SOSTQ9BQB4 213 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 MND1Q9BWT6 205 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 NXF5Q9H1B4 397 aaKnown RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 MMP28Q9H239 520 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 IKZF5Q9H5V7 419 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 ABCB9Q9NP78 766 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 TIGARQ9NQ88 270 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 NLE1Q9NVX2 485 aaPredicted RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 MED9Q9NWA0 146 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 NDUFB11Q9NX14 153 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 ZNF226Q9NYT6 803 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 MAT2BQ9NZL9 334 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 PURGQ9UJV8 347 aaKnown RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 PILRAQ9UKJ1 303 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 AGO1Q9UL18 857 aaKnown RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 ALG5Q9Y673 324 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 COLEC10Q9Y6Z7 277 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 U3KQ87 197 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 DOCK4Q8N1I0 1966 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 OTOFQ9HC10 1997 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 NYNRINQ9P2P1 1898 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 TRBV7-9A0A0J9YWB2 115 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 SMIM28A0A1B0GU29 152 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 A0A1W2PPV9 198 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 MED19A0JLT2 244 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 INMT-MINDY4F8WBC2 141 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 I3L521 148 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 J3KR12 359 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 M0QZ92 97 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 TNFRSF11BO00300 401 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 MANBAO00462 879 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 MAGEB4O15481 346 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 PLA2G10O15496 165 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 LYRM1O43325 122 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 FADS1O60427 444 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 RAMP3O60896 148 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 CTNSO60931 367 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 GLUD1P00367 558 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 TCRBP04435 133 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 IGF1P05019 195 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 OR56A5P0C7T3 313 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 ZDHHC11BP0C7U3 371 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 HLA-EP13747 358 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 RPS3P23396 243 aaKnown RBP eCLIP4.1□□□□□ -1.75
RTN4-215ENST00000491592 F8A1P23610 371 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 EPHA2P29317 976 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 CRABP1P29762 137 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 HOXD3P31249 432 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 RPL3P39023 403 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 APOBEC1P41238 236 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 INPP1P49441 399 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 COMPP49747 757 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 P2RY4P51582 365 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 ZNF140P52738 457 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 RAG2P55895 527 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 CLDN17P56750 224 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 OR2B8PP59922 312 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 RPS14P62263 151 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 RPL38P63173 70 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 FLI1Q01543 452 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 AESQ08117 197 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 Q0VFX4 171 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 PNRC1Q12796 327 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 KLRB1Q12918 225 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 SRSF6Q13247 344 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 MEF2DQ14814 521 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 ATXN7L3Q14CW9 347 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 ABRAXAS2Q15018 415 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 TAF1AQ15573 450 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 SSX1Q16384 188 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 MICAQ29983 383 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 GTDC1Q4AE62 458 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 LY6G6FQ5SQ64 297 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 OR4A47Q6IF82 309 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 TYW3Q6IPR3 259 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 ADNP2Q6IQ32 1131 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 ANKRD54Q6NXT1 300 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 C3P1Q6ZMU1 363 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 SHFQ7M4L6 423 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 COMMD7Q86VX2 200 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms