RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 BAMBIQ13145 260 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 ETFDHQ16134 617 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 WDFY1Q8IWB7 410 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 SPERTQ8NA61 448 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 ROBO4Q8WZ75 1007 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 NKX3-1Q99801 234 aaPredicted RBP19.99■□□□□ 0.79
USF3-203ENST00000491165 ABHD6Q9BV23 337 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 PRDM14Q9GZV8 571 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 ALX4Q9H161 411 aaPredicted RBP19.99■□□□□ 0.79
USF3-203ENST00000491165 CHST11Q9NPF2 352 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 TAS2R4Q9NYW5 299 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 LRP12Q9Y561 859 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 SESN1Q9Y6P5 492 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 KMT2BQ9UMN6 2715 aaPredicted RBP19.99■□□□□ 0.79
USF3-203ENST00000491165 IGHMP01871 453 aa19.98■□□□□ 0.79
USF3-203ENST00000491165 MELTFP08582 738 aa19.98■□□□□ 0.79
USF3-203ENST00000491165 SFTPCP11686 197 aa19.98■□□□□ 0.79
USF3-203ENST00000491165 SLC35A1P78382 337 aa19.98■□□□□ 0.79
USF3-203ENST00000491165 RGS7BPQ6MZT1 257 aaPredicted RBP19.98■□□□□ 0.79
USF3-203ENST00000491165 ALKAL2Q6UX46 152 aa19.98■□□□□ 0.79
USF3-203ENST00000491165 H1FNTQ75WM6 255 aaPredicted RBP19.98■□□□□ 0.79
USF3-203ENST00000491165 ZNF454Q8N9F8 522 aa19.98■□□□□ 0.79
USF3-203ENST00000491165 CCDC107Q8WV48 283 aa19.98■□□□□ 0.79
USF3-203ENST00000491165 C1orf198Q9H425 327 aa19.98■□□□□ 0.79
USF3-203ENST00000491165 KLHL13Q9P2N7 655 aa19.98■□□□□ 0.79
USF3-203ENST00000491165 CACNA1CQ13936 2221 aa19.98■□□□□ 0.79
USF3-203ENST00000491165 GABRA1P14867 456 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 IGFBP3P17936 291 aaPredicted RBP19.97■□□□□ 0.79
USF3-203ENST00000491165 CALCRP30988 508 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 CSNK2A1P68400 391 aaPredicted RBP19.97■□□□□ 0.79
USF3-203ENST00000491165 ZNF239Q16600 458 aaKnown RBP19.97■□□□□ 0.79
USF3-203ENST00000491165 GLYATL3Q5SZD4 288 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 GSG1LQ6UXU4 331 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 ZNF627Q7L945 461 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 TMEM229BQ8NBD8 167 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 OR52N5Q8NH56 324 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 COQ8AQ8NI60 647 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 SEH1LQ96EE3 360 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 CXorf58Q96LI9 332 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 CHST6Q9GZX3 395 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 POFUT1Q9H488 388 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 SCPEP1Q9HB40 452 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 MED12LQ86YW9 2145 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 AQP7P3A6NL99 342 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 RAB3DO95716 219 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 GLO1Q04760 184 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 GK2Q14410 553 aaPredicted RBP19.97■□□□□ 0.79
USF3-203ENST00000491165 OR6M1Q8NGM8 313 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 SLC25A44Q96H78 314 aaPredicted RBP19.97■□□□□ 0.79
USF3-203ENST00000491165 COQ3Q9NZJ6 369 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 B3GALT5Q9Y2C3 310 aa19.97■□□□□ 0.79
USF3-203ENST00000491165 CRABP1P29762 137 aa19.96■□□□□ 0.79
USF3-203ENST00000491165 CDH26Q8IXH8 852 aa19.96■□□□□ 0.79
USF3-203ENST00000491165 FNDC9Q8TBE3 224 aa19.96■□□□□ 0.79
USF3-203ENST00000491165 NBASA2RRP1 2371 aa19.96■□□□□ 0.79
USF3-203ENST00000491165 H3BUI4 141 aa19.96■□□□□ 0.79
USF3-203ENST00000491165 MELKQ14680 651 aa19.96■□□□□ 0.79
USF3-203ENST00000491165 ADGRE4PQ86SQ3 457 aa19.96■□□□□ 0.79
USF3-203ENST00000491165 SLC25A21Q9BQT8 299 aaPredicted RBP19.96■□□□□ 0.79
USF3-203ENST00000491165 PPA2Q9H2U2 334 aa19.96■□□□□ 0.79
USF3-203ENST00000491165 PFDN2Q9UHV9 154 aa19.96■□□□□ 0.79
USF3-203ENST00000491165 TMEM82A0PJX8 343 aa19.95■□□□□ 0.78
USF3-203ENST00000491165 AQP8O94778 261 aa19.95■□□□□ 0.78
USF3-203ENST00000491165 KRTCAP3Q53RY4 240 aa19.95■□□□□ 0.78
USF3-203ENST00000491165 OR13C3Q8NGS6 347 aa19.95■□□□□ 0.78
USF3-203ENST00000491165 ABHD3Q8WU67 409 aa19.95■□□□□ 0.78
USF3-203ENST00000491165 CPNE4Q96A23 557 aaPredicted RBP19.95■□□□□ 0.78
USF3-203ENST00000491165 SARAFQ96BY9 339 aa19.95■□□□□ 0.78
USF3-203ENST00000491165 C1QTNF6Q9BXI9 259 aa19.95■□□□□ 0.78
USF3-203ENST00000491165 SLCO5A1Q9H2Y9 848 aa19.95■□□□□ 0.78
USF3-203ENST00000491165 CGGBP1Q9UFW8 167 aaPredicted RBP19.95■□□□□ 0.78
USF3-203ENST00000491165 HHLA2Q9UM44 414 aa19.95■□□□□ 0.78
USF3-203ENST00000491165 COA3Q9Y2R0 106 aaPredicted RBP19.95■□□□□ 0.78
USF3-203ENST00000491165 R4GMQ9 66 aa19.95■□□□□ 0.78
USF3-203ENST00000491165 MEGF11A6BM72 1044 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 OR4E1P0C645 316 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 CD37P11049 281 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 RPA2P15927 270 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 TAGLNQ01995 201 aaKnown RBP19.94■□□□□ 0.78
USF3-203ENST00000491165 LINC00052Q96N35 136 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 BBC3Q96PG8 261 aaPredicted RBP19.94■□□□□ 0.78
USF3-203ENST00000491165 A0A0A6YYH2 397 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 A6NJ64 397 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 POM121CA8CG34 1229 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 SRSF10O75494 262 aaKnown RBP19.94■□□□□ 0.78
USF3-203ENST00000491165 SORDQ00796 357 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 POU3F1Q03052 451 aaPredicted RBP19.94■□□□□ 0.78
USF3-203ENST00000491165 GAL3ST1Q99999 423 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 FANCFQ9NPI8 374 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 MED29Q9NX70 200 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 EMC9Q9Y3B6 208 aa19.94■□□□□ 0.78
USF3-203ENST00000491165 A0A1W2PNV4 684 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 OR14I1A6ND48 311 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 EIF1BO60739 113 aaKnown RBP19.93■□□□□ 0.78
USF3-203ENST00000491165 MPZL1O95297 269 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 CYB5AP00167 134 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 AMY2AP04746 511 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 PTGS2P35354 604 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 NUP62P37198 522 aaPredicted RBP19.93■□□□□ 0.78
USF3-203ENST00000491165 ZP4Q12836 540 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms