RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 PPP1R3EQ9H7J1 279 aa13.55□□□□□ -0.24
PCCB-218ENST00000490504 C14orf119Q9NWQ9 140 aa13.55□□□□□ -0.24
PCCB-218ENST00000490504 TAS2R4Q9NYW5 299 aa13.55□□□□□ -0.24
PCCB-218ENST00000490504 PRR14LQ5THK1 2151 aa13.55□□□□□ -0.24
PCCB-218ENST00000490504 CNOT4O95628 575 aaKnown RBP13.54□□□□□ -0.24
PCCB-218ENST00000490504 CALCBP10092 127 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 COX5AP20674 150 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 CFPP27918 469 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 DEFA1P59665 94 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 DEFA3P59666 94 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 OXA1LQ15070 435 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 TRIM16LQ309B1 348 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 UBE2NLQ5JXB2 153 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 NCMAPQ5T1S8 102 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 ASPHD2Q6ICH7 369 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 FAM57BQ71RH2 274 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 SLC16A14Q7RTX9 510 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 UBE2J2Q8N2K1 259 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 DNAAF1Q8NEP3 725 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 LILRB1Q8NHL6 650 aaPredicted RBP13.54□□□□□ -0.24
PCCB-218ENST00000490504 OR51E1Q8TCB6 317 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 IGFBPL1Q8WX77 278 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 AKAP1Q92667 903 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCCB-218ENST00000490504 PGAM5Q96HS1 289 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 USB1Q9BQ65 265 aaKnown RBP13.54□□□□□ -0.24
PCCB-218ENST00000490504 ZNF275Q9NSD4 429 aaPredicted RBP13.54□□□□□ -0.24
PCCB-218ENST00000490504 UPB1Q9UBR1 384 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 MALT1Q9UDY8 824 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 TIMM10BQ9Y5J6 103 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 N6AMT1Q9Y5N5 214 aa13.54□□□□□ -0.24
PCCB-218ENST00000490504 A0A1B0GTI1 187 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 F5H5K5 113 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 M0R135 149 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 HS3ST1O14792 307 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 SYNGR3O43761 229 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 SLC2A1P11166 492 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 ZNF32P17041 273 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 FOXG1P55316 489 aaPredicted RBP13.53□□□□□ -0.24
PCCB-218ENST00000490504 RIPPLY3P57055 190 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 ARF1P84077 181 aaKnown RBP13.53□□□□□ -0.24
PCCB-218ENST00000490504 SHEQ5VZ18 495 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 PRSS45Q7RTY3 260 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 LRRC75A-AS1Q8N1F1 130 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 OR4M1Q8NGD0 313 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 OR1F12Q8NHA8 337 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 ZNF799Q96GE5 643 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 COX4I2Q96KJ9 171 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 GSX1Q9H4S2 264 aaPredicted RBP13.53□□□□□ -0.24
PCCB-218ENST00000490504 LIN7BQ9HAP6 207 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 SLC17A5Q9NRA2 495 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 ETV7Q9Y603 341 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 NF1P21359 2839 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 MEGF11A6BM72 1044 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 OR6C6A6NF89 314 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 DPRXA6NFQ7 191 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 LMX1BO60663 402 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 OCMP0CE72 109 aaPredicted RBP13.53□□□□□ -0.24
PCCB-218ENST00000490504 IL7P13232 177 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 CCL1P22362 96 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 SLC6A9P48067 706 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 SCAND1P57086 179 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 MADCAM1Q13477 382 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 P2RY14Q15391 338 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 BAK1Q16611 211 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 RSPO1Q2MKA7 263 aaPredicted RBP13.53□□□□□ -0.24
PCCB-218ENST00000490504 Q5PR19 223 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 GLT8D1Q68CQ7 371 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 ZNF774Q6NX45 483 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 DOK3Q7L591 496 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 ZNF627Q7L945 461 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 ABHD12BQ7Z5M8 362 aaPredicted RBP13.53□□□□□ -0.24
PCCB-218ENST00000490504 COMMD2Q86X83 199 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 SKA3Q8IX90 412 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 POC5Q8NA72 575 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 SETD6Q8TBK2 473 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 NEUROG1Q92886 237 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 FGGYQ96C11 551 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 PERPQ96FX8 193 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 OR2H1Q9GZK4 316 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 ESRP2Q9H6T0 727 aaKnown RBP13.53□□□□□ -0.24
PCCB-218ENST00000490504 NGBQ9NPG2 151 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 GPR84Q9NQS5 396 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 STEAP1Q9UHE8 339 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 RNF115Q9Y4L5 304 aa13.53□□□□□ -0.24
PCCB-218ENST00000490504 FLNAP21333 2647 aaKnown RBP13.53□□□□□ -0.24
PCCB-218ENST00000490504 C2CD3Q4AC94 2353 aa13.52□□□□□ -0.24
PCCB-218ENST00000490504 A0A0U1RQV5 110 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 RAD51DO75771 328 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 CD3EP07766 207 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 CSF3P09919 207 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 TPTEP56180 551 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 CLDN12P56749 244 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 BSPH1Q075Z2 132 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 FAPQ12884 760 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 PPA1Q15181 289 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 TIMM23BQ5SRD1 257 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 DRAM2Q6UX65 266 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 BAIAP2L2Q6UXY1 529 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 SERPINA12Q8IW75 414 aa13.52□□□□□ -0.25
PCCB-218ENST00000490504 Q8N402 240 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms