RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 THEM6Q8WUY1 208 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 SPTSSAQ969W0 71 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 SIGLEC11Q96RL6 698 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 COPS4Q9BT78 406 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 C1QTNF5Q9BXJ0 243 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 MS4A7Q9GZW8 240 aaPredicted RBP8.7□□□□□ -1.02
TTC28-207ENST00000490475 PLGRKTQ9HBL7 147 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 GCM1Q9NP62 436 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 TRIM36Q9NQ86 728 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 TMEM100Q9NV29 134 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 H2AFY2Q9P0M6 372 aaPredicted RBP8.7□□□□□ -1.02
TTC28-207ENST00000490475 ENOPH1Q9UHY7 261 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 KLHDC2Q9Y2U9 406 aa8.7□□□□□ -1.02
TTC28-207ENST00000490475 CCDC160A6NGH7 325 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 POM121CA8CG34 1229 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 CEACAM18A8MTB9 384 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 M0R135 149 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 WNT2P09544 360 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 SLC2A1P11166 492 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 RPS2P15880 293 aaKnown RBP8.69□□□□□ -1.02
TTC28-207ENST00000490475 OTX1P32242 354 aaPredicted RBP8.69□□□□□ -1.02
TTC28-207ENST00000490475 GATA4P43694 442 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 NPY4RP50391 375 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 MMP16P51512 607 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 RAD23AP54725 363 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 IL13RA1P78552 427 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 PAX8Q06710 450 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 MZT1Q08AG7 82 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 TUSC1Q2TAM9 212 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 OR2T2Q6IF00 324 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 C9orf139Q6ZV77 190 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 SLC16A9Q7RTY1 509 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 OR5AS1Q8N127 324 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 GALNT4Q8N4A0 578 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 PLPP7Q8NBV4 271 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 OR8B3Q8NGG8 313 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 OR11L1Q8NGX0 322 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 OTOSQ8NHW6 89 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 RNF133Q8WVZ7 376 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 NEIL1Q96FI4 390 aaPredicted RBP8.69□□□□□ -1.02
TTC28-207ENST00000490475 ZNF799Q96GE5 643 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 MEGF10Q96KG7 1140 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 OR8B2Q96RD0 313 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 MBOAT4Q96T53 435 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 KCNJ15Q99712 375 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 SLC30A2Q9BRI3 323 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 ZNF747Q9BV97 191 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 PRRG3Q9BZD7 231 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 TOR3AQ9H497 397 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 ORC6Q9Y5N6 252 aa8.69□□□□□ -1.02
TTC28-207ENST00000490475 A0A1B0GUS0 222 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 A0A1B0GWJ7 208 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 E9PQ18 207 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 PHYHO14832 338 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 NDUFA2O43678 99 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 LIPFP07098 398 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 ATP6V1B1P15313 513 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 JUNBP17275 347 aaPredicted RBP8.68□□□□□ -1.02
TTC28-207ENST00000490475 ALOX5APP20292 161 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 RBMXP38159 391 aaKnown RBP8.68□□□□□ -1.02
TTC28-207ENST00000490475 OPRL1P41146 370 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 SLC15A1P46059 708 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 BAMBIQ13145 260 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 GK2Q14410 553 aaPredicted RBP8.68□□□□□ -1.02
TTC28-207ENST00000490475 SNAI3Q3KNW1 292 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 SPRNQ5BIV9 151 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 NXNL2Q5VZ03 156 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 KLBQ86Z14 1044 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 SIGLECL1Q8N7X8 197 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 ZNF454Q8N9F8 522 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 SPERTQ8NA61 448 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 RAB40AQ8WXH6 277 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 BCL7BQ9BQE9 202 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 ADI1Q9BV57 179 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 OPA3Q9H6K4 179 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 BRD7Q9NPI1 651 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 ESM1Q9NQ30 184 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 MMP26Q9NRE1 261 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 SMPD3Q9NY59 655 aaPredicted RBP8.68□□□□□ -1.02
TTC28-207ENST00000490475 DNAJC27Q9NZQ0 273 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 AASSQ9UDR5 926 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 LAMP5Q9UJQ1 280 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 PPIAL4AQ9Y536 164 aa8.68□□□□□ -1.02
TTC28-207ENST00000490475 IGHV2-70DA0A0C4DH43 119 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 PRR32B1ATL7 298 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 ZNF878C9JN71 531 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 TRAPPC2LH3BP13 241 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 PSMD9O00233 223 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 MAGEB4O15481 346 aaPredicted RBP8.67□□□□□ -1.02
TTC28-207ENST00000490475 GMDSO60547 372 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 RNASE1P07998 156 aaKnown RBP8.67□□□□□ -1.02
TTC28-207ENST00000490475 H2BFMP0C1H6 154 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 EGR1P18146 543 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 DCKP27707 260 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 HSD11B1P28845 292 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 CAPGP40121 348 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 CX3CR1P49238 355 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 TMBIM6P55061 237 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 CDC42P60953 191 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 GRB2P62993 217 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms