RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	TRAPPC6A	O75865	159 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	PGAM2	P15259	253 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	DEFA5	Q01523	94 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	SNAI3	Q3KNW1	292 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	MRPL14	Q6P1L8	145 aa	Known RBP	13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	SLC51B	Q86UW2	128 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	EDEM2	Q9BV94	578 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	PIGL	Q9Y2B2	252 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816		A0A0B4J2A0	478 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816		A0A0J9YW62	118 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	RNF222	A6NCQ9	220 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	AQP7P3	A6NL99	342 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	HOXB5	P09067	269 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	RPA2	P15927	270 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	RAB6A	P20340	208 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	OR3A2	P47893	321 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	C9orf135	Q5VTT2	229 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	OR2S2	Q9NQN1	319 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	GPR173	Q9NS66	373 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	TAS2R3	Q9NYW6	316 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	SHPK	Q9UHJ6	478 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	NUP50	Q9UKX7	468 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	SPRY1	O43609	319 aa	Predicted RBP	13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	HIST1H1D	P16402	221 aa	Known RBP	13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	NTF4	P34130	210 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	CSNK2A1	P68400	391 aa	Predicted RBP	13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	SSBP1	Q04837	148 aa	Known RBP	13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	CSNK2A3	Q8NEV1	391 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	THAP6	Q8TBB0	222 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	ELP5	Q8TE02	316 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	DYRK2	Q92630	601 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	CSAG2	Q9Y5P2	127 aa		13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	COL5A1	P20908	1838 aa	Predicted RBP	13.81	□□□□□ -0.2
BRD9-208	ENST00000489816	ADAMTS20	P59510	1910 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	FAM230A	A0A1W2PPH8	454 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	OR6C65	A6NJZ3	312 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	TLX3	O43711	291 aa	Predicted RBP	13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	TPPP	O94811	219 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	RRAD	P55042	308 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	NAXD	Q8IW45	347 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	OR6K3	Q8NGY3	331 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	DCUN1D4	Q92564	292 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	UQCC2	Q9BRT2	126 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	C5orf66	Q9H5L9	145 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	BDP1	A6H8Y1	2624 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	IGKV1D-8	A0A087WSZ0	117 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	KLF7	O75840	302 aa	Predicted RBP	13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	MGMT	P16455	207 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	OPRM1	P35372	400 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	SNU13	P55769	128 aa	Known RBP	13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	RPS19BP1	Q86WX3	136 aa	Known RBP	13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	AKR7L	Q8NHP1	331 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	KCNG3	Q8TAE7	436 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	HPF1	Q9NWY4	346 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	EHF	Q9NZC4	300 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	SESN1	Q9Y6P5	492 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	ZFHX4	Q86UP3	3567 aa		13.8	□□□□□ -0.2
BRD9-208	ENST00000489816	TTC28	Q96AY4	2481 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	TOX3	O15405	576 aa	Predicted RBP	13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	ZIC3	O60481	467 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	SLC35A1	P78382	337 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	MPPED2	Q15777	294 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	TCEAL6	Q6IPX3	200 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	OR14K1	Q8NGZ2	314 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	OR6S1	Q8NH40	331 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	TERB2	Q8NHR7	220 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	EDA	Q92838	391 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	TCEAL3	Q969E4	200 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	FBXO17	Q96EF6	278 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	S100A13	Q99584	98 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	SRXN1	Q9BYN0	137 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	ULBP2	Q9BZM5	246 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	TNFSF18	Q9UNG2	199 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	SVIL	O95425	2214 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	TPD52L2	O43399	206 aa	Known RBP	13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	HOXD4	P09016	255 aa	Predicted RBP	13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	RFPL3S	P0C7P2	107 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	TMEM225B	P0DP42	221 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	CD37	P11049	281 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	PTGFR	P43088	359 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	TAF9	Q16594	264 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	TMEM185A	Q8NFB2	350 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	MITD1	Q8WV92	249 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	OR10A2	Q9H208	303 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	METTL8	Q9H825	291 aa	Known RBP	13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	PROK2	Q9HC23	129 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	B3GALT1	Q9Y5Z6	326 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	CNOT1	A5YKK6	2376 aa	Known RBP	13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	IGHV1-45	A0A0A0MS14	117 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816		A0A0A6YYH2	397 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	NSG1	A0A0A6YYJ2	146 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816		A6NJ64	397 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	B4GALT1	P15291	398 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	MSR1	P21757	451 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	PXT1	Q8NFP0	134 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	OR5H2	Q8NGV7	314 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms