RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 MIOXQ9UGB7 285 aa16.02■□□□□ 0.16
EPHB4-207ENST00000489808 MRM2Q9UI43 246 aaKnown RBP16.02■□□□□ 0.16
EPHB4-207ENST00000489808 POLR3KQ9Y2Y1 108 aaPredicted RBP16.02■□□□□ 0.16
EPHB4-207ENST00000489808 MPC1Q9Y5U8 109 aa16.02■□□□□ 0.16
EPHB4-207ENST00000489808 PPIAL4CA0A0B4J2A2 164 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 A0A1W2PQL4 384 aaPredicted RBP16.01■□□□□ 0.15
EPHB4-207ENST00000489808 J3QLI3 93 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 AVPP01185 164 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 GATA3P23771 443 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 ATP6V1E1P36543 226 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 SEC61A1P61619 476 aaKnown RBP16.01■□□□□ 0.15
EPHB4-207ENST00000489808 HOXA4Q00056 320 aaPredicted RBP16.01■□□□□ 0.15
EPHB4-207ENST00000489808 DCAF12L2Q5VW00 463 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 C1orf229Q6ZS94 237 aaPredicted RBP16.01■□□□□ 0.15
EPHB4-207ENST00000489808 ZNF826PQ6ZT77 177 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 KRT74Q7RTS7 529 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 SSX6Q7RTT6 188 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 WDR86Q86TI4 376 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 GALNT4Q8N4A0 578 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 DEFB108BQ8NET1 73 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 TBX5Q99593 518 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 TMPRSS13Q9BYE2 586 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 NUFIP1Q9UHK0 495 aaKnown RBP16.01■□□□□ 0.15
EPHB4-207ENST00000489808 R4GMQ9 66 aa16.01■□□□□ 0.15
EPHB4-207ENST00000489808 TANC2Q9HCD6 1990 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 A6NLC8 198 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 ZNF850A8MQ14 1090 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 TRAPPC2LH3BP13 241 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 ENTPD6O75354 484 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 APOL3O95236 402 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 LHBP01229 141 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 IGLV3-1P01715 115 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 ATP6V1B1P15313 513 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 MAP2K3P46734 347 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 IL5RAQ01344 420 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 MFGE8Q08431 387 aaPredicted RBP16■□□□□ 0.15
EPHB4-207ENST00000489808 OCLNQ16625 522 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 ESCO2Q56NI9 601 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 MEDAGQ5VYS4 303 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 C19orf18Q8NEA5 215 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 OR1M1Q8NGA1 313 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 OR51E1Q8TCB6 317 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 PIGCQ92535 297 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 ITPKCQ96DU7 683 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 MDFIQ99750 246 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 MICU1Q9BPX6 476 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 GPR84Q9NQS5 396 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 MMP26Q9NRE1 261 aa16■□□□□ 0.15
EPHB4-207ENST00000489808 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16■□□□□ 0.15
EPHB4-207ENST00000489808 ANXA2P2A6NMY6 339 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 A8MXK9 166 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 LOC110117498-PIK3R3F6TDL0 507 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 LGALS8O00214 317 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 PHF1O43189 567 aaPredicted RBP15.99■□□□□ 0.15
EPHB4-207ENST00000489808 TTRP02766 147 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 RPS2P15880 293 aaKnown RBP15.99■□□□□ 0.15
EPHB4-207ENST00000489808 PRDX4Q13162 271 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 ZNF684Q5T5D7 378 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 SFRP4Q6FHJ7 346 aaPredicted RBP15.99■□□□□ 0.15
EPHB4-207ENST00000489808 PLEKHG7Q6ZR37 379 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 DCDC5Q6ZRR9 648 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 GCSAMQ8N6F7 178 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 BOLLQ8N9W6 283 aaKnown RBP15.99■□□□□ 0.15
EPHB4-207ENST00000489808 OR10H4Q8NGA5 316 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 OR5P3Q8WZ94 311 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 STMN2Q93045 179 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 NEIL1Q96FI4 390 aaPredicted RBP15.99■□□□□ 0.15
EPHB4-207ENST00000489808 C7orf69Q9H7B7 122 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 METTL17Q9H7H0 456 aaPredicted RBP15.99■□□□□ 0.15
EPHB4-207ENST00000489808 RNPEPL1Q9HAU8 725 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 ABCB9Q9NP78 766 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 OR52A1Q9UKL2 312 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 LRCH1Q9Y2L9 728 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 GMPPBQ9Y5P6 360 aa15.99■□□□□ 0.15
EPHB4-207ENST00000489808 ZNF816-ZNF321PA0A0X1KG74 233 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 METTL15A6NJ78 407 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 TNFRSF13BO14836 293 aaPredicted RBP15.98■□□□□ 0.15
EPHB4-207ENST00000489808 SULT1C4O75897 302 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 KRT8P05787 483 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 MTNR1AP48039 350 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 RIPPLY1Q0D2K3 151 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 ZNF154Q13106 437 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 KCNJ8Q15842 424 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 FAM76BQ5HYJ3 339 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 LYPD2Q6UXB3 125 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 ELMOD2Q8IZ81 293 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 TEX29Q8N6K0 151 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 YIPF7Q8N8F6 280 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 SEMA6DQ8NFY4 1073 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 FAM71F1Q96KD3 344 aaPredicted RBP15.98■□□□□ 0.15
EPHB4-207ENST00000489808 HIST1H2AAQ96QV6 131 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 RTL8AQ9BWD3 113 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 MOB1AQ9H8S9 216 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 FAM118AQ9NWS6 357 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 METRNQ9UJH8 293 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 SNX5Q9Y5X3 404 aa15.98■□□□□ 0.15
EPHB4-207ENST00000489808 LOC105371242A0A075B767 164 aa15.97■□□□□ 0.15
EPHB4-207ENST00000489808 LOC100130705A0A1B0GUX0 176 aa15.97■□□□□ 0.15
EPHB4-207ENST00000489808 hCG_1807616A0A1W2PRN6 198 aa15.97■□□□□ 0.15
EPHB4-207ENST00000489808 C3orf80F5H4A9 247 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms