RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 OR4M2Q8NGB6 313 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 OR2T27Q8NH04 317 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 Q8TCH9 128 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 PIGCQ92535 297 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 UBE2FQ969M7 185 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 SLC29A1Q99808 456 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 MICU1Q9BPX6 476 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 TMEM165Q9HC07 324 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 FAM206AQ9NX38 181 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 MIOXQ9UGB7 285 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 RHBDD3Q9Y3P4 386 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 MPC1Q9Y5U8 109 aa11.24□□□□□ -0.61
CCL28-202ENST00000489442 ZNF850A8MQ14 1090 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 CEACAM18A8MTB9 384 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 KIAA1324LA8MWY0 1029 aaPredicted RBP11.23□□□□□ -0.61
CCL28-202ENST00000489442 PRR32B1ATL7 298 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 LOC110117498-PIK3R3F6TDL0 507 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 ENTPD6O75354 484 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 RPP14O95059 124 aaKnown RBP11.23□□□□□ -0.61
CCL28-202ENST00000489442 GATA3P23771 443 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 MTNR1AP48039 350 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 IL5RAQ01344 420 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 PRDX4Q13162 271 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 KCNJ8Q15842 424 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 ZSCAN26Q16670 478 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 FAM201AQ5SY85 155 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 BCL2L15Q5TBC7 163 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 KCTD8Q6ZWB6 473 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 NLRC3Q7RTR2 1065 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 OR51E1Q8TCB6 317 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 FAM71F1Q96KD3 344 aaPredicted RBP11.23□□□□□ -0.61
CCL28-202ENST00000489442 LYZL4Q96KX0 146 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 TMEM246Q9BRR3 403 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 RTL8AQ9BWD3 113 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 MOB1AQ9H8S9 216 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 ABCB9Q9NP78 766 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 GPR84Q9NQS5 396 aa11.23□□□□□ -0.61
CCL28-202ENST00000489442 A0A1W2PQL4 384 aaPredicted RBP11.22□□□□□ -0.61
CCL28-202ENST00000489442 METTL15A6NJ78 407 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 MTRF1O75570 445 aaKnown RBP11.22□□□□□ -0.61
CCL28-202ENST00000489442 PTBP3O95758 552 aaKnown RBP11.22□□□□□ -0.61
CCL28-202ENST00000489442 ATP6V1B1P15313 513 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 CPT2P23786 658 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 ACKR3P25106 362 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 SNRPGP62308 76 aaKnown RBP11.22□□□□□ -0.61
CCL28-202ENST00000489442 ZNF404Q494X3 552 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 SFRP4Q6FHJ7 346 aaPredicted RBP11.22□□□□□ -0.61
CCL28-202ENST00000489442 PLEKHG7Q6ZR37 379 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 ZNF826PQ6ZT77 177 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 TEX29Q8N6K0 151 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 C19orf18Q8NEA5 215 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 ZNF555Q8NEP9 628 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 SEMA6DQ8NFY4 1073 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 OR8B3Q8NGG8 313 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 RNF170Q96K19 258 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 OR8B2Q96RD0 313 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 MBOAT4Q96T53 435 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 TRIM36Q9NQ86 728 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 NUFIP1Q9UHK0 495 aaKnown RBP11.22□□□□□ -0.61
CCL28-202ENST00000489442 MRM2Q9UI43 246 aaKnown RBP11.22□□□□□ -0.61
CCL28-202ENST00000489442 OR52A1Q9UKL2 312 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 SNX5Q9Y5X3 404 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 R4GMQ9 66 aa11.22□□□□□ -0.61
CCL28-202ENST00000489442 TRAV38-1A0A0B4J264 116 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 ZNF816-ZNF321PA0A0X1KG74 233 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 C3orf80F5H4A9 247 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 J3QLI3 93 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 PHF1O43189 567 aaPredicted RBP11.21□□□□□ -0.61
CCL28-202ENST00000489442 MPZL2O60487 215 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 FSTL3O95633 263 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 CST4P01036 141 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 WNT2P09544 360 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 ZFP36P26651 326 aaKnown RBP11.21□□□□□ -0.61
CCL28-202ENST00000489442 SEC61A1P61619 476 aaKnown RBP11.21□□□□□ -0.61
CCL28-202ENST00000489442 GNB2P62879 340 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 MFGE8Q08431 387 aaPredicted RBP11.21□□□□□ -0.61
CCL28-202ENST00000489442 RIPPLY1Q0D2K3 151 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 SCGB2A2Q13296 93 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 OCLNQ16625 522 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 LRRC36Q1X8D7 754 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 SLC25A30Q5SVS4 291 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 DCDC5Q6ZRR9 648 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 SSX6Q7RTT6 188 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 FAM220AQ7Z4H9 259 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 ZDHHC23Q8IYP9 409 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 GALNT4Q8N4A0 578 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 OR1M1Q8NGA1 313 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 ITFG2Q969R8 447 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 PPP1R14AQ96A00 147 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 RNFT2Q96EX2 444 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 NEIL1Q96FI4 390 aaPredicted RBP11.21□□□□□ -0.61
CCL28-202ENST00000489442 Q96MT0 163 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 SSBP3Q9BWW4 388 aaPredicted RBP11.21□□□□□ -0.61
CCL28-202ENST00000489442 C7orf69Q9H7B7 122 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 PPP1R3EQ9H7J1 279 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 G6PC2Q9NQR9 355 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 FAM118AQ9NWS6 357 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 OR5V1Q9UGF6 321 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 PIGLQ9Y2B2 252 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 LRCH1Q9Y2L9 728 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms